Job Description Q46799 Confidence 100.00% Date Thu Jan 5 12:34:21 GMT 2012 Rank 6 Aligned Residues 712 % Identity 25% Template c1wygA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s) Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		M	R	V	D	A	I	A	K	V	T	G	R	A	R	Y	T	D	D	Y	.	V	M	A	G	M	C	Y	A	K	Y	V	R	S	P	I	A	H	G	Y	A	V	S	I	N	D	E	Q	A	R	S	L	P	G	V	L	A	I	F	T	W	E	D	V	P	D	I	P	F	A	T	A	G	H	A	W	T	L	D	E	N
Query Conservation																					.
Alig confidence																					.																																																						.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		P	H	L	A	A	N	M	Q	A	S	G	E	A	V	Y	C	D	D	I	P	R	Y	E	N	E	L	S	L	R	L	V	T	S	T	R	A	H	A	K	I	T	S	I	D	T	S	E	A	K	K	V	P	G	F	V	C	F	L	T	A	E	D	V	P	N	S	N	A	T	G	L	F	N	.	.	.	.	.	.	.
Template Known Secondary structure				T	T							T		S			G	G	G	S				S	S										S	S	S	S									T	T	G	G	G	S	T	T							S	T	T		S	S					S	T	T	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	D	T	A	D	R	A	L	L	T	R	H	V	R	H	H	G	D	A	V	A	I	V	V	A	R	D	E	L	T	A	E	K	A	A	Q	L	V	S	I	E	W	Q	E	L	P	V	I	T	T	P	E	A	A	L	A	E	D	A	A	P	I	H	N	G	G	N	L	L	K	Q	S	T	M	S	T	G	N	V
Query Conservation
Alig confidence		.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	E	T	V	F	A	K	D	E	V	T	C	V	G	H	I	I	G	A	V	V	A	D	T	P	E	H	A	Q	R	A	A	R	G	V	K	I	T	Y	E	D	L	P	A	I	I	T	I	Q	D	A	I	N	N	.	.	.	.	.	.	.	N	S	F	Y	G	S	E	I	K	I	E	K	G	D	L
Template Known Secondary structure		.	.	.	.				S	S			S				S	T	T									S	S									T	T													S								.	.	.	.	.	.	.	T		B	S	S	S							S
Template Predicted Secondary structure		.	.	.	.																																																							.	.	.	.	.	.	.
Template SS confidence
						651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.								.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Q	Q	T	I	D	A	A	D	Y	Q	V	Q	G	H	Y	Q	T	P	V	I	Q	H	C	H	M	E	S	V	T	S	L	A	W	M	E	.	D	D	S	R	I	T	I	V	S	S	T	Q	I	P	H	I	V	R	R	V	V	G	Q	A	L	D	I	P	W	S	C	V	R	V	I	K	P	F	V	G	G	G	F	G
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		K	K	G	F	S	E	A	D	N	V	V	S	G	E	L	Y	I	G	G	Q	E	H	F	Y	L	E	T	N	C	T	I	A	V	P	K	G	E	A	G	E	M	E	L	F	V	S	T	Q	N	T	M	K	T	Q	S	F	V	A	K	M	L	G	V	P	D	N	R	I	V	V	R	V	K	R	M	G	G	G	F	G
Template Known Secondary structure							T		S												B					S	S										S	S	T	T									S														T			G	G	G						S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		N	K	Q	D	V	L	.	E	E	P	M	A	A	F	L	T	S	K	L	G	G	I	P	V	K	V	S	L	S	R	E	E	C	F	L	A	T	R	T	R	H	A	F	T	I	D	G	Q	M	G	V	N	R	D	G	T	L	K	G	Y	S	L	D	V	L	S	N	T	G	A	Y	A	S	H	G	H	S	I	A	S
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		G	K	E	T	R	S	T	V	V	S	T	A	L	A	L	A	A	H	K	T	G	R	P	V	R	C	M	L	D	R	D	E	D	M	L	I	T	G	G	R	H	P	F	L	A	K	Y	K	V	G	F	M	K	T	G	T	V	V	A	L	E	V	A	H	F	S	N	G	G	N	T	E	D	L	S	R	S	I	M	E
Template Known Secondary structure		T	T	S	S	S	T															S	S																		B													T	T	S															S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	N	K	V	A	Y	L	Y	P	R	C	A	Y	A	Y	S	S	K	T	C	Y	T	N	L	P	S	A	G	A	M	R	G	Y	G	A	P	Q	V	V	F	A	V	E	S	M	L	D	D	A	A	T	A	L	G	I	D	P	V	E	I	R	L	R	N	A	A	R	E	G	D	A	N	P	L	T	G	K	R
Query Conservation
Alig confidence																																																																														.
Template Conservation																																																																														.
Template Sequence		R	A	L	F	H	M	D	N	A	Y	K	I	P	N	I	R	G	T	G	R	I	C	K	T	N	L	P	S	N	T	A	F	R	G	F	G	G	P	Q	G	M	L	I	A	E	Y	W	M	S	E	V	A	I	T	C	G	L	P	A	E	E	V	R	R	K	N	M	Y	K	E	G	D	L	T	H	F	.	N	Q	K
Template Known Secondary structure					T	T	T	T	T	T	B			S	S											S	S							T	T	T	T																				T	S										B			T	T		B		T	T	.			B
Template Predicted Secondary structure																																																																														.
Template SS confidence
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.		.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.				.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		I	Y	S	A	G	L	P	E	C	L	E	K	G	R	K	I	F	E	W	E	K	R	R	A	.	.	.	E	C	Q	N	Q	Q	G	N	L	R	R	G	V	G	V	A	C	F	S	Y	T	S	N	T	W	P	V	G	V	E	I	A	G	A	R	L	L	M	N	Q	D	G	T	I	N	V	Q	S	G	A	T	E	I
Query Conservation																										.	.	.
Alig confidence																										.	.	.
Template Conservation
Template Sequence		L	E	G	F	T	L	P	R	C	W	D	E	C	I	A	S	S	Q	Y	L	A	R	K	R	E	V	E	K	F	N	R	E	N	R	W	K	K	R	G	L	C	I	I	P	T	K	F	G	I	S	F	T	L	P	F	L	N	Q	G	G	A	L	V	H	V	Y	T	D	G	S	V	L	L	T	H	G	G	T	E	M
Template Known Secondary structure				S															T														S		S	S															S		S	S	G	G	G											T	T	S							S				S
Template Predicted Secondary structure
Template SS confidence
		959	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	G	A	D	T	V	F	S	Q	M	V	A	E	T	V	G	V	P	V	S	D	V	R	V	I	S	T	Q	D	T	D	V	T	P	F	D	P	G	A	F	A	S	R	Q	S	Y	V	A	A	P	A	L	R	S	A	A	L	L	L	K	E	K	I	I	A	H	A	A	V	M	L	H	Q	S	A	M	N	L	T
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		G	Q	G	L	H	T	K	M	V	Q	V	A	S	R	A	L	K	I	P	T	S	K	I	H	I	.	S	E	T	S	T	N	T	V	P	N	T	S	P	T	A	A	S	A	S	A	D	L	N	G	Q	G	V	Y	E	A	C	Q	T	I	L	K	R	L	E	P	F	K	K	K	K	P	T	G	P	W	E	A	W	V
Template Known Secondary structure		S	S														T	T	S		G	G	G				.					T	T	T	S		S				S		T	T	T																											S	T	T	S
Template Predicted Secondary structure																											.
Template SS confidence
		1039	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.		.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	K	G	H	I	V	L	V	E	R	P	E	E	P	L	M	S	L	K	D	L	A	M	D	A	F	Y	H	P	E	R	G	G	Q	L	S	A	E	S	S	I	K	T	T	T	N	P	P	A	F	G	C	T	F	V	D	L	T	V	D	I	A	L	C	K	V	T	I	N	R	I	L	N	V	H	D	S	G	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	D	A	Y	T	S	A	V	S	L	S	A	T	G	F	Y	K	T	P	N	L	G	.	Y	S	F	E	T	N	S	G	N	P	F	H	Y	F	S	Y	G	V	A	C	S	E	V	E	I	D	C	L	T	G	D	H	K	N	L	R	T	D	I	V	M	D	V	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.						T	T												T	T			.		B	T	T	T	T	B	S				S															T	T	T	S		B				B								B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
														1118	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.		.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure																																																							.										.
Query SS confidence																																																							.										.
Query Sequence		I	L	N	P	L	L	A	E	G	Q	V	H	G	G	M	G	M	G	I	G	W	A	L	F	E	E	M	I	I	D	A	K	S	G	V	V	R	N	P	N	L	L	D	Y	K	M	P	T	M	P	D	L	P	.	Q	L	E	S	A	F	V	E	I	.	N	E	P	Q	S	A	Y	G	H	K	S	L	G	E	P	P
Query Conservation																																																							.										.
Alig confidence																																.																							.										.
Template Conservation																																.
Template Sequence		S	L	N	P	A	I	D	I	G	Q	V	E	G	A	F	V	Q	G	L	G	L	F	T	M	E	E	L	H	Y	S	.	P	E	G	S	L	H	T	R	G	P	S	T	Y	K	I	P	A	F	G	S	I	P	I	E	F	R	V	S	L	L	R	D	C	P	N	K	R	A	I	Y	A	S	K	A	V	G	E	P	P
Template Known Secondary structure			S																						T					B		.	T	T	S		B				S	T	T	T	S					G	G	G	S		S	S							S	S				T	T	T	G	G	G	B				S	S	G	G
Template Predicted Secondary structure																																.
Template SS confidence
		1185	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.		.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.
		713	.	.	.	.	.				.	720	.	.	.	.	.	.	.				.	.	730	.	.	.	.	.						.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure								.	.	.										.	.	.									.	.	.	.	.
Query SS confidence								.	.	.										.	.	.									.	.	.	.	.
Query Sequence		I	I	P	V	A	A	.	.	.	A	I	R	N	A	V	K	M	A	.	.	.	T	G	V	A	I	N	T	L	.	.	.	.	.	P	L	T	P	K	R	L	Y	E	E	F
Query Conservation								.	.	.										.	.	.									.	.	.	.	.
Alig confidence								.	.	.										.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		L	F	L	A	S	S	I	F	F	A	I	K	D	A	I	R	A	A	R	A	Q	H	G	D	N	A	K	Q	L	F	Q	L	D	S	P	A	T	P	E	K	I	R	N	A	C
Template Known Secondary structure		G	G	G	G																T	T	S	S			S		S	S					B	S										S
Template Predicted Secondary structure
Template SS confidence
		1264	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.