Job Description Q46799 Confidence 100.00% Date Thu Jan 5 12:34:21 GMT 2012 Rank 9 Aligned Residues 713 % Identity 25% Template c1dgjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774 Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		R	V	D	A	I	A	K	V	T	G	R	A	R	Y	T	D	D	Y	V	M	.	.	.	A	G	M	C	Y	A	K	Y	V	R	S	P	I	A	H	G	Y	A	V	S	I	N	D	E	Q	A	R	S	L	P	G	V	L	A	I	F	T	W	E	D	V	P	D	I	P	F	A	T	A	G	H	A	W	T	L	D	E
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																																								.
Template Conservation																																																																																.
Template Sequence		R	P	S	A	V	A	K	V	T	G	L	A	E	F	G	A	D	A	A	L	R	M	P	E	N	T	L	H	L	A	L	A	Q	A	K	V	S	H	A	L	I	K	G	I	D	T	S	E	A	E	K	M	P	G	V	Y	K	V	L	T	H	K	D	V	K	G	K	N	R	I	T	G	L	I	T	F	P	T	.	N
Template Known Secondary structure			T	T							T				B					G	G	G	S		T	T										S	S	S	S														S	T	T							G	G	G			S		S					S	S			T	T	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		N	K	R	D	T	A	D	R	A	L	L	T	R	H	V	R	H	H	G	D	A	V	A	I	V	V	A	R	D	E	L	T	A	E	K	A	A	Q	L	V	S	I	E	W	Q	E	L	P	V	I	T	T	P	E	A	A	L	A	E	D	A	A	P	I	H	N	.	G	G	N	L	L	K	Q	S	T	M	S	T	G
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		K	G	D	G	W	E	R	P	I	L	N	D	S	K	I	F	Q	Y	G	D	A	L	A	I	V	C	A	D	S	E	A	N	A	R	A	A	A	E	K	V	K	F	D	L	E	L	L	P	E	Y	M	S	A	P	E	A	M	A	P	D	A	I	E	I	H	P	G	T	P	N	V	Y	Y	D	Q	L	E	E	K	G
Template Known Secondary structure		S	S		S					S	S		S	S				S	T	T									S	S									T	T													S						S	T	T				S	B	T	T	B		S										S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		158	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.
Predicted Secondary structure										.	.																																																													.
Query SS confidence										.	.																																																													.
Query Sequence		N	V	Q	Q	T	I	D	A	.	.	A	D	Y	Q	V	Q	G	H	Y	Q	T	P	V	I	Q	H	C	H	M	E	S	V	T	S	L	A	W	M	E	D	D	S	R	I	T	I	V	S	S	T	Q	I	P	H	I	V	R	R	V	V	G	Q	A	L	D	I	P	W	S	C	.	V	R	V	I	K	P	F	V	G
Query Conservation										.	.																																																													.
Alig confidence										.	.																																																													.
Template Conservation
Template Sequence		E	D	T	V	P	F	F	N	D	P	A	N	V	V	A	E	G	S	Y	Y	T	Q	R	Q	P	H	L	P	I	E	P	D	V	G	Y	G	Y	I	N	E	Q	G	Q	V	V	I	H	S	K	S	V	A	I	H	L	H	A	L	M	I	A	P	G	L	G	L	E	F	P	K	D	L	V	L	V	Q	N	T	T	G
Template Known Secondary structure		S		S					S		T	T	S																	S	S										T	T	S									S														T			T	T	T	T							B		S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	F	G	N	K	Q	D	V	L	E	E	P	M	A	A	F	L	T	S	K	L	G	G	I	P	V	K	V	S	L	S	R	E	E	C	F	L	A	T	R	T	R	H	A	F	T	I	D	G	Q	M	G	V	N	R	D	G	T	L	K	G	Y	S	L	D	V	L	S	N	T	G	A	Y	A	S	H	G	H	S
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		G	T	F	G	Y	K	F	S	P	T	M	E	A	L	.	V	G	V	A	V	M	A	T	G	R	P	C	H	L	R	Y	N	Y	E	Q	Q	Q	N	Y	T	G	K	R	S	P	F	W	T	T	M	R	Y	A	A	D	R	Q	G	K	I	L	A	M	E	T	D	W	S	V	D	H	G	P	Y	S	E	F	G	D	L
Template Known Secondary structure				T	T	G	G	G	S		S	S				.										S														S	S		B														T	T	S															S			T	T
Template Predicted Secondary structure																.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	A	G	G	N	K	V	A	Y	L	Y	P	R	C	A	Y	A	Y	S	S	K	T	C	Y	T	N	L	P	S	A	G	A	M	R	G	Y	G	A	P	Q	V	V	F	A	V	E	S	M	L	D	D	A	A	T	A	L	G	I	D	P	V	E	I	R	L	R	N	A	A	R	E	G	D	A	N	P	L	T
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		L	T	L	R	G	A	Q	Y	I	G	A	G	Y	G	I	A	N	I	R	G	T	G	R	T	V	A	T	N	H	C	W	G	A	A	F	R	G	Y	G	A	P	E	S	E	F	P	S	E	V	L	M	D	E	L	A	E	K	L	G	M	D	P	F	E	L	R	A	L	N	C	Y	R	E	G	D	T	T	S	S	.
Template Known Secondary structure										T	T	T	T	B			S												S	S			B				T	T	T	T																				T											B			T	T				T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	I	Y	S	A	G	L	P	E	C	L	E	K	G	R	K	I	F	E	W	E	K	R	R	A	E	C	Q	N	Q	Q	G	N	L	R	R	G	V	G	V	A	C	F	S	Y	T	S	N	T	W	P	V	G	V	E	I	A	G	A	R	L	L	M	N	Q	D	G	T	I	N	V	Q	S	G	A	T	E	I
Query Conservation
Alig confidence																											.																										.	.
Template Conservation																											.																										.	.
Template Sequence		G	Q	I	P	E	V	M	S	L	P	E	M	F	D	K	M	R	P	Y	Y	E	E	S	K	K	.	R	V	K	E	R	S	T	A	E	I	K	R	G	V	G	V	A	L	G	V	Y	G	A	G	L	.	.	D	G	P	D	T	S	E	A	W	V	E	L	N	D	D	G	S	V	T	L	G	N	S	W	E	D	H
Template Known Secondary structure		S				S																					.				T	T			S	S															S	S	.	.	S	S	S											T	T	S											S
Template Predicted Secondary structure																											.																										.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.			.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.				490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		G	Q	G	A	D	T	V	F	S	Q	M	V	A	E	T	.	.	.	V	G	V	P	V	S	D	V	R	V	I	S	T	Q	D	T	D	V	T	P	F	D	P	G	A	F	A	S	R	Q	S	Y	V	A	A	P	A	L	R	S	A	A	L	L	L	K	E	K	I	I	A	H	A	A	V	M	L	H	Q	S	A	M
Query Conservation																	.	.	.
Alig confidence																	.	.	.													.
Template Conservation																																.
Template Sequence		G	Q	G	A	D	A	G	S	L	G	T	A	H	E	A	L	R	P	L	G	I	T	P	E	N	I	H	L	V	M	.	N	D	T	S	K	T	P	N	S	G	P	A	G	G	S	R	S	Q	V	V	T	G	N	A	I	R	V	A	C	E	M	L	I	E	G	M	R	K	P	G	G	G	F	F	T	P	A	E	M
Template Known Secondary structure		S	S														T	G	G	G	T			G	G	G						.	S	B	T	T	T	S						S		T	T		T	T	T																	T	B		S	S	S	S	B
Template Predicted Secondary structure																																.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.		.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	T	L	I	K	G	H	I	V	L	V	E	R	P	E	E	P	L	M	S	L	K	D	L	A	M	D	A	F	Y	H	P	E	R	G	G	Q	L	S	A	E	S	S	I	K	T	T	T	N	P	P	A	F	G	C	T	F	V	D	L	T	V	D	I	A	L	C	K	V	T	I	N	R	I	L	N	V	H	D
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	E	G	R	P	M	R	Y	D	G	K	W	T	A	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	C	D	A	K	G	Q	G	S	P	F	A	C	Y	M	Y	G	L	F	L	T	E	V	A	V	E	V	A	T	G	K	A	T	V	E	K	M	V	C	V	A	D
Template Known Secondary structure				T	T												S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B				T	T	S		S	B			S															T	T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.																					.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.		.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		S	G	H	I	L	N	P	L	L	A	E	G	Q	V	H	G	G	M	G	M	G	I	G	W	A	L	F	E	E	M	I	I	D	A	K	S	G	V	V	R	N	P	N	L	L	D	Y	K	M	P	T	M	P	D	L	P	.	Q	L	E	S	A	F	V	E	I	N	E	P	Q	S	A	Y	G	H	K	S	L	G	E
Query Conservation																																																										.
Alig confidence																																.	.	.	.	.																						.
Template Conservation																																.	.	.	.	.
Template Sequence		I	G	K	I	C	N	K	L	V	V	D	G	Q	I	Y	G	G	L	A	Q	G	V	G	L	A	L	S	E	D	Y	.	.	.	.	.	E	D	L	K	K	H	S	T	M	G	G	A	G	I	P	S	I	K	M	I	P	D	D	I	E	I	V	Y	V	E	T	P	R	K	D	G	P	F	G	A	S	G	V	G	E
Template Known Secondary structure			B	S		S																						T				.	.	.	.	.		S	T	T	T	T	S	S	T	T	T	T	T				G	G	G	S		S												T	T	S	G	G	G	B				T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.						.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	I	I	P	V	A	A	A	I	R	N	A	V	K	M	A	T	G	V	A	I	N	T	L	P	L	T	P	K	R	L	Y	E	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	L	T	A	P	H	A	A	I	I	N	G	I	Y	N	A	C	G	A	R	V	R	H	L	P	A	R	P	E	K	V	L	E	A	M
Template Known Secondary structure		G	G	G	S	S														S					B	S										T
Template Predicted Secondary structure
Template SS confidence
		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.