Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 18 Aligned Residues 227 % Identity 20% Template d1vfsa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	.	.	.	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H	L	V	Q	I	P	C
Query Conservation																																			.	.	.
Alig confidence																			.	.															.	.	.																																					.
Template Conservation																			.	.																																																						.
Template Sequence		D	L	D	A	V	R	A	N	V	R	A	L	R	A	R	A	P	.	.	R	S	A	L	M	A	V	V	K	S	N	A	Y	G	H	G	A	V	P	C	A	R	A	A	Q	E	A	G	A	A	W	L	G	T	A	T	P	E	E	A	L	E	L	R	A	A	G	I	Q	G	R	I	M	.	C	W	L	W	T	P	G
Template Known Secondary structure															T	T	S	T	.	.	T	S												T	T													T							S	S										T	T			S				.						T	T
Template Predicted Secondary structure																			.	.																																																						.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	.	.	.	N	L	P	G	L	H	L
Query Conservation																																																																								.	.	.
Alig confidence													.																													.									.	.	.	.	.	.																.	.	.
Template Conservation													.																													.									.	.	.	.	.	.
Template Sequence		G	P	W	R	E	A	I	E	T	D	I	.	D	V	S	V	S	G	M	W	A	L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	Q	L	.	A	D	T	G	L	G	R	N	.	.	.	.	.	.	G	C	Q	P	A	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	E	G	T	V	Q	V
Template Known Secondary structure										T	T		.						S															T	S							.			S	S			S	S	.	.	.	.	.	.	S																			T	T	S
Template Predicted Secondary structure													.																													.									.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L	T	G	T	I	P	A	N	Q
Query Conservation
Alig confidence								.	.																																												.	.	.
Template Conservation								.	.																																												.	.	.
Template Sequence		T	G	V	W	S	H	.	.	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D	M	L	A	Y	A	E	K	E	G	V	D	P	E	V	R	H	I	A	N	S	P	A	.	.	.	T	L	T	L	P	E	T	H	F	D	L	V	R	T	G	L	A	V	Y	G	V	S	P	S	P	E
Template Known Secondary structure								.	.		S	S	T	T	S	T	T																					T	T				S										.	.	.					G	G	G		S	S						G	G	G	G	T			S		G	G
Template Predicted Secondary structure								.	.																																												.	.	.
Template SS confidence
		163	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		268	.				270	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		Q	G	.	.	.	D	Q	P	E	R	I	A
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		L	G	T	P	A	Q	L	G	L	R	P	A
Template Known Secondary structure		G			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions