Return to main results Retrieve Phyre Job Id

Job DescriptionP45550
Confidence99.64%DateThu Jan 5 12:03:07 GMT 2012
Rank51Aligned Residues110
% Identity15%Templated1vfsa1
SCOP infoDomain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Alanine racemase
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.. .......290.........300.........310.........320 .........330. .
Predicted Secondary structure 






...
























............





.
Query SS confidence 













. . .





































. . . . . . . . . . . .










.
Query Sequence  GDQPERIAMLWLSE. . . ISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITET. . . . . . . . . . . . NLKTVDDSSID. Y
Query Conservation        


  

 ...
  
  
    


          
 
  
  

    ............ 
       

. 
Alig confidence 













...





































............










.
Template Conservation 
    


 

 
 
  

 
  
  



    
  
  



 





  
  
    


 
   





 

  
Template Sequence  PTRVYAEIMTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGRGPVLVAGKIRRAAGRIAMDQF
Template Known Secondary structure 
SS




TT
SGGG

SSS


TTTT

GGGTTT
TTB
S


SS
Template Predicted Secondary structure 








































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   333... ...340...... ...350.........360.........370 ........
Predicted Secondary structure 


.







.












......

Query SS confidence 



.









.























. . . . . .







Query Sequence  TLPL. AGEFPVSSAV. VLCFRTQIFVTRSDVVLVSGIHRG. . . . . . EPEIVGRY
Query Conservation      .     


 
.
   
 
 


    
   
    ...... 
      
Alig confidence 



.









.























......







Template Conservation 




   
  

 
 
 
      

    
   


 



  
  

 


Template Sequence  VVDLGEDLAEAGDEAVILGDAERGEPTAEDWAQAAHTIAYEIVTRIGGRVPRVY
Template Known Secondary structure  T



TT


GGGT


TTS
T

TTS

Template Predicted Secondary structure 






























Template SS confidence 





















































   322.......330.........340.........350.........360.........370.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions