Job Description P45550 Confidence 99.90% Date Thu Jan 5 12:03:07 GMT 2012 Rank 41 Aligned Residues 196 % Identity 13% Template d1twia2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	.	H	Q	G	H	L	V	Q	I	P	C	H	Q
Query Conservation																																																																					.
Alig confidence																				.													.														.																						.
Template Conservation																				.													.														.
Template Sequence		N	Y	N	R	Y	I	E	A	F	K	R	W	E	E	E	T	G	K	.	E	F	I	V	A	Y	A	Y	K	A	N	A	.	N	L	A	I	T	R	L	L	A	K	L	G	C	.	G	A	D	V	V	S	G	G	E	L	Y	I	A	K	L	S	N	V	P	S	K	K	I	V	F	N	G	N	C	K	T	K	E	E
Template Known Secondary structure																		S		.								G	G	G			.											T	T		.						S										T	T			G	G	G						S	S
Template Predicted Secondary structure																				.													.														.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.										.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.										.	.
Query Sequence		V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	.	.	.	.	.	.	.	.	Q	E	S	G	F	A	L	K	V	.	.	L	P	E	I	V	A	E	I	Q	N	L
Query Conservation																																																				.	.	.	.	.	.	.	.										.	.
Alig confidence																																																				.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		I	I	M	G	I	E	A	N	I	R	A	F	N	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	G	L	D	V	E	S	G	I	A	M	K	A	I	K	M	A	L	E	M
Template Known Secondary structure								T	T		S						S															T															T	T	T											S	S		S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		E	Y	V	N	V	V	G	V	H	C	H	.	.	.	I	G	S	Q	L	T	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E	L	K	E	E	G	I	E	I	E	D	V	N	L	G	G
Template Known Secondary structure		S	S										.	.	.			S	S	B			S																				T	T				S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions