Return to main results Retrieve Phyre Job Id

Job DescriptionP45550
Confidence88.08%DateThu Jan 5 12:03:07 GMT 2012
Rank72Aligned Residues180
% Identity14%Templated1thfd_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80...... ...90.........100.........110.........120........ .130.....
Predicted Secondary structure 





..........
















..
Query SS confidence 


















. . . . . . . . . .









































. .






Query Sequence  WLAEKLLALGYSGIVAVDY. . . . . . . . . . KEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFT. . LDKAREV
Query Conservation   


 
   
   
 

 
.......... 

  
   

   

  
   
       
        
 
..   
  
Alig confidence 


















..........









































..






Template Conservation    
      

  
 
 


    
       
  
     


    

   
        

  
 
           
Template Sequence  ELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLI
Template Known Secondary structure  TT

SS
SSSTT

S
SS

STT
SS
T
Template Predicted Secondary structure 

























Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   136...140... ......150.........160....... ..170.........180.........190.........200.........210..
Predicted Secondary structure 

.
















..





















Query SS confidence 







.























. .












































Query Sequence  SAAAVKAG. RIQSVLLKVYSDDDFLYPGQESGF. . ALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLH
Query Conservation     
   
.    
 
 

 
  
   

 

 ..  
        
  
  
 
 

 

       
        
  
Alig confidence 







.























..













.












.......









Template Conservation         
   
                             
       . 
   
    
  ....... 
        
Template Sequence  TQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK. RGAGEILLTSIDR. . . . . . . DGTKSGYDTE
Template Known Secondary structure 
GGGTTTTTT.TT
STTT.......TTS
S


Template Predicted Secondary structure 




















.








.......







Template SS confidence 















































































   114.....120.........130.........140.........150.........160.. .......170..... ....180.....
 
   213......220.........230.........240.........250.........260
Predicted Secondary structure 















Query SS confidence 















































Query Sequence  TLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALT
Query Conservation          
   
     
  
 
 
        
 
   



 


Alig confidence 







.....


































Template Conservation   
  
   .....    

  


 
 


      


 






 
Template Sequence  MIRFVRPL. . . . . TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFH
Template Known Secondary structure  GGG.....

S
S


STT
SS
Template Predicted Secondary structure 

.....











Template SS confidence 















































   186...190... ......200.........210.........220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions