Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 20 Aligned Residues 220 % Identity 15% Template d1rcqa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.45

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	.	.	.	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H	L	V	Q	I	P
Query Conservation																																	.	.	.
Alig confidence																			.	.	.												.	.	.											.
Template Conservation																			.	.	.																									.
Template Sequence		I	D	L	Q	A	L	R	H	N	Y	R	L	A	R	E	A	T	.	.	.	G	A	R	A	L	A	V	I	K	A	D	A	Y	G	H	G	A	V	R	C	A	E	A	L	.	A	A	E	A	D	G	F	A	V	A	C	I	E	E	G	L	E	L	R	E	A	G	I	R	Q	P	I	L	L	L	E	G	F	F	E
Template Known Secondary structure																			.	.	.		S												T	T										.	T	T	T		S					S	S										T	T			S					T	T			S	S
Template Predicted Secondary structure																			.	.	.																									.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G
Query Conservation
Alig confidence														.																		.	.	.																		.	.	.	.	.	.
Template Conservation														.																		.	.	.																		.	.	.	.	.	.
Template Sequence		A	S	E	L	E	L	I	V	A	H	D	F	.	W	C	V	V	H	C	A	W	Q	L	E	A	I	E	R	A	S	.	.	.	L	A	R	P	L	N	V	W	L	M	D	S	G	M	H	R	V	.	.	.	.	.	.	G	F	F	P	E	D	F	R	A	A	H	E	R	L	R	A	S	G	K	V	A	K	I	V
Template Known Secondary structure		G	G	G							T	T		.						S												.	.	.		S	S									S	S	S		S	S	.	.	.	.	.	.	S																T	T
Template Predicted Secondary structure														.																		.	.	.																		.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L	T	G	T	I	P	A	N	Q	Q	G
Query Conservation
Alig confidence						.	.																														.	.	.	.	.	.									.	.	.
Template Conservation						.	.																														.	.	.	.	.	.									.	.	.
Template Sequence		M	M	S	H	.	.	F	S	R	A	D	E	L	D	C	P	R	T	E	E	Q	L	A	A	F	S	A	A	S	Q	G	L	E	G	E	.	.	.	.	.	.	I	S	L	R	N	S	P	A	.	.	.	V	L	G	W	P	K	V	P	S	D	W	V	R	P	G	I	L	L	Y	G	A	T	P	F	E	R	A	H
Template Known Secondary structure						.	.		S	S	T	T		T	T		T														T	T			S		.	.	.	.	.	.									.	.	.					T	T	S			S						G	G	G	G	T			S	S	S	S
Template Predicted Secondary structure						.	.																														.	.	.	.	.	.									.	.	.
Template SS confidence
		155	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		270	.			.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		D	Q	.	.	P	E	R	I	A	M
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		P	L	A	D	R	L	R	P	V	M
Template Known Secondary structure		T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions