Job Description P45550 Confidence 99.92% Date Thu Jan 5 12:03:07 GMT 2012 Rank 39 Aligned Residues 199 % Identity 17% Template d1hkva2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.6

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	.	H	Q	G	H	L	V	Q	I	P	C	H	Q
Query Conservation																																																																					.
Alig confidence																				.													.														.																						.
Template Conservation																				.													.														.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	G	S	.	G	A	N	V	H	Y	A	A	K	A	F	L	.	C	S	E	V	A	R	W	I	S	E	E	G	L	.	C	L	D	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	R	I	T	L	H	G	N	N	K	S	V	S	E
Template Known Secondary structure																	T	T	S	.	G	G	G	B				G	G	G	S		.												T		.						S										T	T			G	G	G						S	S
Template Predicted Secondary structure																				.													.														.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.																			.	.
Query SS confidence																																															.	.	.	.	.	.	.	.																			.	.
Query Sequence		V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	.	.	.	.	.	.	.	.	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	.	.	V	A	E	I	Q	N	L
Query Conservation																																															.	.	.	.	.	.	.	.																			.	.
Alig confidence																																															.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		L	T	A	A	V	K	A	G	V	G	H	I	V	V	D	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G	A	A	M	A	A	V	R	R	V	F	A	T
Template Known Secondary structure									T								S															T												S						T						S	S			S	S	S	S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		183	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure													.																													.
Query SS confidence													.																													.
Query Sequence		P	G	L	H	L	A	G	L	T	H	F	.	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	.	A	K	S	G	I	A	L	E	Q	L	N	A	P	S
Query Conservation													.																													.
Alig confidence													.																													.
Template Conservation
Template Sequence		D	H	L	R	L	V	G	L	H	S	H	I	G	S	Q	I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V	V	G	E	F	G	P	E	K	T	A	Q	I	A	T	V	D	L	G	G
Template Known Secondary structure		S	S																	S																										S	T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions