Job Description P45550 Confidence 99.91% Date Thu Jan 5 12:03:07 GMT 2012 Rank 40 Aligned Residues 182 % Identity 16% Template d1f3ta2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	.	H	Q	G	H	L	V	Q	I	P	C	H	Q
Query Conservation																																																																					.
Alig confidence																		.	.														.														.																						.
Template Conservation																		.	.														.														.
Template Sequence		D	L	G	D	I	V	R	K	H	E	T	W	K	K	C	L	.	.	P	R	V	T	P	F	Y	A	V	K	C	N	D	.	D	W	R	V	L	G	T	L	A	A	L	G	T	.	G	F	D	C	A	S	N	T	E	I	Q	R	V	R	G	I	G	V	P	P	E	K	I	I	Y	A	N	P	C	K	Q	I	S	H
Template Known Secondary structure																		.	.	T	T							G	G	G			.											T	T		.						S										T	T			G	G	G						S	S
Template Predicted Secondary structure																		.	.														.														.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G	L	T	H
Query Conservation
Alig confidence																									.	.	.	.															.	.					.	.	.	.	.	.																		.
Template Conservation																									.	.	.	.															.	.					.	.	.	.	.	.																		.
Template Sequence		I	R	Y	A	R	D	S	G	V	D	V	M	T	F	D	C	V	D	E	L	E	K	V	.	.	.	.	A	K	T	H	P	K	A	K	M	V	L	R	I	S	.	.	T	V	K	F	.	.	.	.	.	.	G	A	K	V	E	D	C	R	F	I	L	E	Q	A	K	K	L	.	N	I	D	V	T	G	V	S	F
Template Known Secondary structure								T	T								S								.	.	.	.					T	T							B		.	.				S	.	.	.	.	.	.		B															T	.	T
Template Predicted Secondary structure																									.	.	.	.															.	.					.	.	.	.	.	.																		.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S
Query Conservation
Alig confidence			.	.				.
Template Conservation			.	.				.
Template Sequence		H	.	.	V	G	S	.	G	S	T	D	A	S	T	F	A	Q	A	I	S	D	S	R	F	V	F	D	M	G	T	E	L	G	F	N	M	H	I	L	D	I	G	G
Template Known Secondary structure			.	.			S	.			S		T																				T	T
Template Predicted Secondary structure			.	.				.
Template SS confidence
		197			.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions