Job Description P45550 Confidence 99.87% Date Thu Jan 5 12:03:07 GMT 2012 Rank 45 Aligned Residues 191 % Identity 15% Template d1d7ka2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.10

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	.	H	Q	G	H	L	V	Q	I	P	C	H	Q
Query Conservation																																																																					.
Alig confidence																		.	.									.					.														.																						.
Template Conservation																		.	.									.					.														.
Template Sequence		D	L	G	D	I	L	K	K	H	L	R	W	L	K	A	L	.	.	P	R	V	T	P	F	Y	A	.	V	C	N	D	.	S	K	A	I	V	K	T	L	A	A	T	G	T	.	G	F	D	C	A	S	K	T	E	I	Q	L	V	Q	S	L	G	V	P	P	E	R	I	I	Y	A	N	P	C	K	Q	V	S	Q
Template Known Secondary structure																		.	.	T	T							.					.												T		.						S									T	T	T			G	G	G						S	S
Template Predicted Secondary structure																		.	.									.					.														.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.		.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G	L	T	H
Query Conservation
Alig confidence																																																	.	.																				.
Template Conservation																																																	.	.																				.
Template Sequence		I	K	Y	A	A	N	N	G	V	Q	M	M	T	F	D	S	E	V	E	L	M	K	V	A	R	A	H	P	K	A	K	L	V	L	R	I	A	T	D	D	S	K	A	V	C	R	L	.	.	S	V	K	F	G	A	T	L	R	T	S	R	L	L	L	E	R	A	K	.	E	L	N	I	D	V	V	G	V	S	F
Template Known Secondary structure								T	T								S												T	T							B							S				S	.	.			S	S		B														.		T	T
Template Predicted Secondary structure																																																	.	.																				.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S
Query Conservation
Alig confidence			.	.					.
Template Conservation			.	.					.
Template Sequence		H	.	.	V	G	S	G	.	C	T	D	P	E	T	F	V	Q	A	I	S	D	A	R	C	V	F	D	M	G	A	E	V	G	F	S	M	Y	L	L	D	I	G	G
Template Known Secondary structure			.	.			T	T	.		S		T																					T
Template Predicted Secondary structure			.	.					.
Template SS confidence
		197			.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions