Return to main results Retrieve Phyre Job Id

Job DescriptionP45550
Confidence22.56%DateThu Jan 5 12:03:07 GMT 2012
Rank177Aligned Residues91
% Identity14%Templated1d3ga_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60. ........70.........80.....
Predicted Secondary structure 


.....










.........................
Query SS confidence 

























. . . . .























. . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  DQILENGKRLIETARLYGIELYLMTK. . . . . QFGRNPWLAEKLLALGYSGIVAVD. . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 
  
   
       

 
  
 
.....
    
 


 
   
   
 

 .........................
Alig confidence 




















..


.....























.........................
Template Conservation           
  
      

.. 


 
          
      
 


   

                

 

   
Template Sequence  RLLTKVLQERDGLRRVHRPAV. . LVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPL
Template Known Secondary structure  TS
GGG

..
S


T




BS


TT


TTTTSSSGGG
Template Predicted Secondary structure 




..































Template SS confidence 















































































   232.......240.........250.. .......260.........270.........280.........290.........300.........
 
   86...90..... ....100.........110.........120........
Predicted Secondary structure  ....
.















Query SS confidence  . . . .









.
































Query Sequence  . . . . YKEARVMRRA. GLPVAHQGHLVQIPCHQVADAVEQGTDVITVFT
Query Conservation  ....
 

  
   .

   

  
   
       
        
 
Alig confidence  ....









.
































Template Conservation      
  
  
       



  


    

   
  


 
 
 
Template Sequence  RDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT
Template Known Secondary structure  TTT
S
SS

ST
SS
Template Predicted Secondary structure 














Template SS confidence 















































   310.........320.........330.........340.........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions