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Job DescriptionP45550
Confidence64.93%DateThu Jan 5 12:03:07 GMT 2012
Rank98Aligned Residues165
% Identity14%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80... ......90..... ....100........ .110.........120.... .....130.
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Query Sequence  WLAEKLLALGYSGIVA. . . . . . . . . . . . VDYKEARVMRRA. GLPVAHQGHLVQI. PCHQVADAVEQGTDVI. . TVFTLDK
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Template Sequence  AECLRXLDSGADYLHLDVXDGHFVPNITFGHPVVESLRKQLGQDPFFDXHXXVSKPEQWVKPXAVAGANQYTFHLEATEN
Template Known Secondary structure  TT
S
BSSSSS
B



SSS

S
T
SGGG
S
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   132.......140.........150.........160.........170.........180.........190 .........200.........210
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Query Sequence  AREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGL. THFPCLLWDEAVGKVLPTPN
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Template Sequence  PGALIKDIRENGXKVGLAIKPGTSVEYL. . . . . . . . . . . . . . . . . . . APWANQIDXALVXTVEPGFG. . . . . GQKFXEDX
Template Known Secondary structure  TT

TTS
GGGG...................TTTGGGSSSS
TT
S.....S



GGG
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   101........110.........120........ .130.........140........ .150......
 
   211........220.........230.........240.........250.........260.
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Query Sequence  LHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTG
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Template Sequence  XPKV. . . . HWLRTQFPSLDIEVDGGVGP. DTVHKCAEAGANXIVSGSAIXR
Template Known Secondary structure  ....
TT
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ST.TTT



T
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   157..160 .........170.........180 .........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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