Job Description P45550 Confidence 31.33% Date Thu Jan 5 12:03:07 GMT 2012 Rank 147 Aligned Residues 128 % Identity 14% Template c3pajA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating; PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961 Resolution 2.00 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.															.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	.	.	.	Y	S	G	I	V	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	K	E	A	R	V	M	R	R	A	G	L
Query Conservation																																													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	G	C	A	T	A	T	A	R	Y	V	Q	E	L	K	G	T	Q	C	R	L	L	D	T	R	K	T	I	P	G	L	R	S	A	L	K	Y	A	V	A	C	G	G	G	Y	N	H	R	I	G	V	F	D	A	Y	L	I	K	E	N	H	I	I	A	C	G	G	I	R	Q	A	I	S	T	A	K	Q	L	N
Template Known Secondary structure																	T	T	S	S							S				T	T												T	T		B				S	S	S	S	S													T	S												S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A
Query Conservation
Alig confidence													.																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	K	P	V	E	V	E	T	E	T	.	L	A	E	L	E	E	A	I	S	A	G	A	D	I	I	M	L	D	N	F	S	.	L	E	M	M	R	E	A	V	K	I	N	A	G	R	A	A	L	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	N	I	T	L	D	N	L	K	E	C	A	E
Template Known Secondary structure		T	T	S							S	S	.										T	T		S						S			.												T	T	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.		S	S											T
Template Predicted Secondary structure													.																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.														.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions