Job Description P45550 Confidence 99.84% Date Thu Jan 5 12:03:07 GMT 2012 Rank 48 Aligned Residues 219 % Identity 12% Template c3n2oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: x-ray crystal structure of arginine decarboxylase complexed with2 arginine from vibrio vulnificus Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		A	L	I	S	A	A	L	S	L	W	Q	Q	G	K	I	A	P	D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	.	.	.	.	.	.	.	.	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence																			.																							.	.	.	.	.	.	.	.														.															.	.	.	.
Template Conservation																			.																																												.
Template Sequence		Q	L	S	K	I	V	K	Q	L	E	E	R	Q	L	N	V	P	.	V	L	V	R	F	P	Q	I	L	H	Q	R	V	H	S	I	C	D	A	F	N	Q	A	I	E	E	Y	Q	Y	P	N	K	Y	L	L	V	Y	P	I	K	V	N	Q	.	Q	R	E	V	V	D	E	I	L	A	S	Q	A	Q	L	E	T	K
Template Known Secondary structure													T	T			S	S	.																												T		S	S								G	G	G			.															S	T	T
Template Predicted Secondary structure																			.																																												.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.																						.																				.	.	.					.
Query SS confidence		.	.																						.																				.	.	.					.
Query Sequence		.	.	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	.	H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	.	.	.	G	T	D	V	.	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V
Query Conservation		.	.																						.																				.	.	.					.
Alig confidence		.	.																						.																				.	.	.					.
Template Conservation
Template Sequence		Q	L	G	L	E	A	G	S	K	P	E	L	L	A	V	L	A	M	A	Q	H	A	S	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	L	G	H	K	V	F	I	V	L	E	K	M	S	E	L	D	L	V	L	R	E	A	K	S	L	G	V	T	P	R	L	G	I	R	I
Template Known Secondary structure									S											T	S	S	S								S																T	T									S	T														T									B
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																								.
Query SS confidence												.	.	.	.	.	.	.																								.
Query Sequence		Y	S	D	D	D	F	L	Y	P	G	.	.	.	.	.	.	.	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	.	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S
Query Conservation												.	.	.	.	.	.	.																								.
Alig confidence												.	.	.	.	.	.	.																								.									.	.	.
Template Conservation																																																			.	.	.
Template Sequence		R	L	A	S	Q	G	A	G	K	W	Q	A	S	G	G	E	K	S	K	F	G	L	S	A	S	Q	V	L	N	V	I	S	R	L	K	K	E	N	Q	L	D	T	L	Q	L	V	H	F	H	.	.	.	L	G	S	Q	M	A	N	I	R	D	V	R	N	G	V	N	E	S	A	R	F	Y	C	E	L	R	T	L
Template Known Secondary structure				S	T	T	S	T	T	T	T		S	S	S	S							B															T	T		G	G	G								.	.	.			S	S	B																							T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		225	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	L	E	Q	L	N	A	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	N	I	T	Y	F	D	V	G	G
Template Known Secondary structure		T										S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions