Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 16 Aligned Residues 315 % Identity 18% Template c3llxA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:predicted amino acid aldolase or racemase; PDBTitle: crystal structure of an ala racemase-like protein (il1761) from2 idiomarina loihiensis at 1.50 a resolution Resolution 1.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	P	D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		H	P	D	T	P	Y	L	L	I	D	E	A	K	L	K	S	N	I	N	Y	L	K	Q	R	V	E	S	L	G	S	H	L	R	P	H	L	T	.	.	L	R	T	L	E	A	A	G	Y	L	L	D	S	K	S	A	P	A	T	V	S	T	L	A	E	A	E	A	Y	A	K	A	G	Y	T	D	L	L	Y	A	V
Template Known Secondary structure		S	S		S	S																							T	T			B			B			.	.			B									S	S	T	T	S					S	S										T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		105	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure							.														.
Query SS confidence							.														.
Query Sequence		L	V	Q	I	P	.	C	H	Q	V	A	D	A	V	E	Q	G	T	D	.	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L
Query Conservation							.														.
Alig confidence							.														.																																						.	.	.	.	.	.							.	.
Template Conservation																																																											.	.	.	.	.	.							.	.
Template Sequence		G	I	A	P	A	K	L	K	R	V	A	A	L	R	Q	Q	G	I	N	L	H	I	L	L	D	N	I	T	Q	A	Q	A	V	V	D	Y	A	A	E	F	G	Q	D	F	S	V	F	I	E	I	D	S	D	D	H	R	G	.	.	.	.	.	.	G	I	K	P	S	D	.	.	S	K	L	L	T	I	A	K	T
Template Known Secondary structure					G	G	G										T	T									S															T									B		S	S	S	S	S	S	.	.	.	.	.	.		B		T	T		.	.	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.							.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.			.	.	.	.	.	.	.	.	160
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	.	.	.	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L
Query Conservation																		.	.	.
Alig confidence																		.	.	.																																																	.	.
Template Conservation																																																																					.	.
Template Sequence		L	G	E	H	F	T	G	L	X	T	H	A	G	G	S	Y	A	C	N	T	E	Q	G	L	K	N	F	A	K	Q	E	C	D	A	V	R	I	A	R	N	N	L	E	T	A	G	I	H	C	A	I	T	S	V	G	S	T	P	T	A	H	F	G	E	D	F	S	.	.	D	I	S	E	V	R	A	G	V	Y	T
Template Known Secondary structure			G	G	G									G	G	G	G	G			S																									T	T																		S			T	.	.	T		S						G	G	G
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.
		260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.										.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure								.																						.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence								.																						.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		T	G	T	I	P	A	.	N	Q	Q	G	D	Q	P	E	R	I	A	M	L	W	L	S	E	I	S	H	H	.	.	F	R	G	D	S	Y	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	.	.	.	.	.	.	.	.	.	T	E	T	N	L	K	T	V	D	D
Query Conservation								.																						.	.																																.	.	.	.	.	.	.	.	.
Alig confidence								.																						.	.																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	D	L	V	X	K	N	I	G	V	C	D	F	S	H	I	A	X	S	V	V	T	T	V	I	G	H	N	K	E	K	N	W	L	L	T	D	S	G	W	X	A	L	S	R	D	S	G	T	A	G	Q	N	R	D	F	G	Y	G	Q	V	C	K	I	D	G	S	V	L	D	G	L	C	V	N	S	T	S	Q
Template Known Secondary structure		T									T	S			G	G	G														T	T	T	T					S								S			G	G	G	G	S	S	S			B	T						T	T	S								B					S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		S	S	I	D	Y	T	L	P	L	A	G	.	.	.	E	F	P	V	S	S	A	V	V	L	C	F	R
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		E	H	G	V	I	E	L	S	D	A	Y	Q	L	E	D	F	P	V	G	H	Q	L	R	I	X	P	N
Template Known Secondary structure		S								T	T			G	G	G	S		T	T								S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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