Job Description P45550 Confidence 91.87% Date Thu Jan 5 12:03:07 GMT 2012 Rank 63 Aligned Residues 124 % Identity 17% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	.	.	.	.	.	.	.	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																				.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	.	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D
Template Known Secondary structure											T		S							G	G	G													T	S			S	S						.			S											T	T		S								G	G	G
Template Predicted Secondary structure																																														.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
						129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																		.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	S	D	D	D	F	L	Y	P	G	Q	.	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H
Query Conservation		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D
Template Known Secondary structure																			T	T								T	T	G	G	G	S																		S							S	S	S																			S	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		187	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	L	T	H	F
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		I	.	E	C	H	F	H
Template Known Secondary structure			.					B
Template Predicted Secondary structure			.
Template SS confidence
		221		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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