Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 1 Aligned Residues 337 % Identity 17% Template c3e6eC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from e.faecalis2 complex with cycloserine Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		G	K	I	A	P	D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	.	.	.	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A
Query Conservation																																										.	.	.
Alig confidence																														.												.	.	.
Template Conservation																														.
Template Sequence		G	W	H	R	P	T	R	L	H	I	D	T	Q	A	I	T	E	N	V	Q	K	E	C	Q	R	L	P	E	.	G	T	A	L	F	A	V	V	K	A	N	G	Y	G	H	G	A	V	E	S	A	K	A	A	K	K	G	G	A	T	G	F	C	V	A	L	L	D	E	A	I	E	L	R	E	A	G	V	Q	D	P
Template Known Secondary structure			T	T	S	S																			T	T	S		T	.	T														T											T	T	T							S	S										T	T			S
Template Predicted Secondary structure																														.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	.	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I
Query Conservation																																				.
Alig confidence				.																			.													.																										.	.	.	.	.
Template Conservation				.																			.																																							.	.	.	.	.
Template Sequence		I	L	.	I	L	S	V	V	D	L	A	Y	V	P	L	L	I	Q	Y	D	L	.	S	V	T	V	A	T	Q	E	W	L	E	A	A	L	Q	Q	L	T	P	E	S	N	T	P	L	R	V	H	L	K	V	D	T	G	M	G	R	I	.	.	.	.	.	G	F	L	T	P	E	E	T	K	Q	A	V	R	F	V
Template Known Secondary structure				.			S				G	G	G							T	T		.															T	T	S		T	T		S	S								B		S	S	S		S	S	.	.	.	.	.	S	B
Template Predicted Secondary structure				.																			.																																							.	.	.	.	.
Template SS confidence
		83	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	L	P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L
Query Conservation
Alig confidence																.	.																															.	.	.											.	.	.
Template Conservation																.	.																															.	.	.											.	.	.
Template Sequence		Q	S	H	K	E	F	L	W	E	G	I	F	T	H	.	.	F	S	T	A	D	E	I	D	T	S	Y	F	E	K	Q	A	G	R	F	K	A	V	L	A	V	L	E	E	L	P	.	.	.	R	Y	V	H	V	S	N	S	A	T	.	.	.	A	L	W	H	P	D	V	P	G	N	M	I	R	Y	G	V	A	M
Template Known Secondary structure			T		T	T										.	.		S	S	T	T	S	S																	T	T		S	S			.	.	.	S										.	.	.						S	S			S						G	G	G
Template Predicted Secondary structure																.	.																															.	.	.											.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320												.	.	.
Predicted Secondary structure												.	.														.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.														.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	T	I	P	A	N	Q	Q	G	.	.	D	Q	P	E	R	I	A	M	L	W	L	S	E	.	.	.	I	S	H	H	F	R	G	D	S	Y	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	T	E	T	.	.	.	.	.	.	.	.	.	.	.	N	L	K
Query Conservation												.	.														.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.														.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	L	N	P	S	G	N	K	L	A	P	S	Y	A	L	K	P	A	L	R	L	T	S	E	L	I	H	V	K	R	L	A	A	G	E	G	I	G	Y	G	E	T	Y	V	T	E	A	E	E	W	I	G	T	V	P	I	G	Y	A	D	G	W	L	R	H	L	Q	G	F	T	V	L	V	N	G	K	R	C	E
Template Known Secondary structure		G	T			T	T	T	T	S	S			S	S													S							T	T				S	G	G	G					S	S	S							S			T	T	T	T			G	G	G	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.										.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																.																	.	.	.	.	.	.	.	.	.
Query SS confidence										.																.																	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	D	D	S	S	I	D	.	Y	T	L	P	L	A	G	E	F	P	V	S	S	A	V	.	V	L	C	F	R	T	Q	I	F	V	T	R	S	D	V	V	.	.	.	.	.	.	.	.	.	L	V	S	G	I	H	R	G	E	P	E	I	V	G	R	Y	D
Query Conservation										.																.																	.	.	.	.	.	.	.	.	.
Alig confidence										.																.																	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation																																																										.	.	.
Template Sequence		I	V	G	R	V	C	M	D	Q	C	M	I	R	L	A	E	E	V	P	V	G	P	V	V	T	L	V	G	K	D	G	N	E	E	N	T	L	Q	M	V	A	E	K	L	E	T	I	H	Y	E	V	A	C	T	F	S	.	.	.	Q	R	I	P	R	E	Y	N
Template Known Secondary structure				S				S	S							S	S				S											T	T													T	S									S		.	.	.	T	T	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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