Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 27 Aligned Residues 219 % Identity 18% Template c3cpgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an unknown protein from bifidobacterium2 adolescentis Resolution 1.71 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Query Sequence		I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	.	.	.	.	.	.	.	.	.	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.											.			.																																		.	.	.	.	.
Template Conservation																																								.			.
Template Sequence		A	R	A	R	E	I	T	D	G	V	H	R	V	L	D	R	I	A	A	A	E	E	Q	A	G	R	E	A	G	S	V	R	L	L	A	A	T	K	.	T	R	.	D	I	G	E	I	X	A	A	I	D	A	G	V	R	X	I	G	E	N	R	P	Q	E	V	T	A	K	A	E	G	L	A	R	R	C	A	E	R
Template Known Secondary structure																									T	T			T	T	S	S							T	.	T		.											T	T							S																			T
Template Predicted Secondary structure																																								.			.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
												99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	V	A	H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		G	F	S	L	G	V	A	A	A	E	H	I	P	F	H	L	I	G	Q	L	Q	S	N	K	I	G	K	V	L	P	V	V	D	T	I	E	S	V	D	S	I	D	L	A	E	K	I	S	R	R	A	V	A	R	G	I	T	V	G	V	L	L	E	V	N	E	S	G	E	E	.	.	.	.	S	K	S	G	C	D
Template Known Secondary structure		T																	S				G	G	G					T	T	T		S																						T									B			S	S		T	.	.	.	.	T	S	S	S	B
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y
Query Conservation
Alig confidence																																																																								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		P	A	H	A	I	R	I	A	Q	K	I	G	T	L	D	G	I	E	L	Q	G	L	X	T	I	G	A	H	V	H	D	E	T	V	I	R	R	G	F	S	H	L	R	K	T	R	D	L	I	L	A	S	G	E	P	G	T	D	R	C	R	E	L	S	X	G	X	T	G	D	.	.	.	X	E	L	A	I	A	E
Template Known Secondary structure		G	G	G										T		T	T													S	S																									T	T		T	T									T	T	T	.	.	.							T
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	T	H	A	E	P	G	H	A	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	T	I	V	R	V	G	T	A	I	F
Template Known Secondary structure		T		S					S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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