Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 12 Aligned Residues 317 % Identity 14% Template c3co8B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from oenococcus oeni Resolution 1.70 Å

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		28	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure							.																																				.	.	.
Query SS confidence							.																																				.	.	.
Query Sequence		P	D	S	W	V	.	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	.	.	.	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G
Query Conservation							.																																				.	.	.
Alig confidence							.																			.	.																.	.	.																																				.
Template Conservation																										.	.																																																						.
Template Sequence		R	S	T	R	I	E	F	S	K	S	S	L	A	Y	N	V	Q	Y	T	K	Q	V	S	G	.	.	A	K	T	L	W	L	A	V	K	S	N	A	Y	G	H	G	L	L	Q	V	S	K	I	A	R	E	C	G	V	D	G	L	A	V	S	V	L	D	E	G	I	A	I	R	Q	A	G	I	D	D	F	I	L	.
Template Known Secondary structure																										.	.		S												T	T									T	T	T	T	T							S	S										T	T			S				.
Template Predicted Secondary structure																										.	.																																																						.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180		.
Predicted Secondary structure																																																																		.														.
Query SS confidence																																																																		.														.
Query Sequence		H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	.	A	L	K	V	L	P	E	I	V	A	E	I	Q	.	N
Query Conservation																																																																		.														.
Alig confidence																				.																			.	.																		.	.	.	.	.	.			.														.
Template Conservation																				.																			.	.																		.	.	.	.	.	.
Template Sequence		I	L	G	P	I	D	V	K	Y	A	P	I	A	S	K	Y	H	F	.	L	T	T	V	S	S	L	D	W	L	K	S	A	D	K	I	L	G	.	.	K	E	K	L	S	V	N	L	A	V	D	T	G	X	N	R	I	.	.	.	.	.	.	G	V	R	S	K	K	D	L	K	D	E	I	E	F	L	Q	E	H
Template Known Secondary structure				S				G	G	G							T	T		.															T	T		T	.	.	T									B		S	S	S		S	S	.	.	.	.	.	.	S	B		S														T
Template Predicted Secondary structure																				.																			.	.																		.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L	T	G
Query Conservation
Alig confidence														.	.																											.	.	.	.
Template Conservation														.	.																											.	.	.	.
Template Sequence		S	D	H	F	S	Y	D	G	I	F	T	H	.	.	F	A	S	S	D	N	P	D	D	H	Y	F	Q	R	Q	K	N	R	W	Y	E	L	I	D	G	L	.	.	.	.	I	X	P	R	Y	V	H	V	X	N	S	G	A	A	X	Y	H	S	K	E	L	P	G	C	N	S	I	A	R	V	G	T	V	V	Y	G
Template Known Secondary structure		T	T	T										.	.		S	S	T	T		S																	T	T	S	.	.	.	.				S					B								S	G	G	G		T	T	S		S					S	T	T	T	T	T
Template Predicted Secondary structure														.	.																											.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320												.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	P	A	N	Q	Q	G	.	.	D	Q	P	E	R	I	A	M	L	W	L	S	E	I	S	H	H	F	R	G	D	S	Y	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	T	E	T	.	.	.	.	.	.	.	.	.	.	.	N	L	K	T	V	D	D	S
Query Conservation										.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	P	S	E	G	V	L	G	P	I	D	K	L	K	P	V	F	E	L	K	S	A	L	T	F	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	W	I	G	T	L	P	I	G	Y	G	D	G	W	L	A	E	Y	Q	D	F	Q	L	L	I	D	G	Q	K	C	R	Q	V	G	Q	I
Template Known Secondary structure				T	T	S	S	S	S	S		S	T	T	S											S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S			G	G	G	T			G	G	G	T	T						T	T							S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		329	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.							.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																.																					.	.	.	.	.	.
Query SS confidence					.																.																					.	.	.	.	.	.
Query Sequence		S	I	D	.	Y	T	L	P	L	A	G	E	F	P	V	S	S	A	V	.	V	L	C	F	R	T	Q	I	F	V	T	R	S	D	V	V	L	V	S	G	.	.	.	.	.	.	I	H	R	G	E	P	E	I	V	G	R	Y
Query Conservation					.																.																					.	.	.	.	.	.
Alig confidence					.																.																					.	.	.	.	.	.
Template Conservation
Template Sequence		A	X	D	Q	X	X	V	A	L	P	H	E	Y	P	I	G	T	E	V	T	L	I	G	K	S	G	K	Y	E	N	T	L	Y	D	L	H	K	H	S	G	V	P	P	W	K	I	T	V	A	F	S	D	R	L	K	R	X	V
Template Known Secondary structure			S	S							S	S				T	T										T	T													S									T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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