Job Description P45550 Confidence 99.95% Date Thu Jan 5 12:03:07 GMT 2012 Rank 37 Aligned Residues 314 % Identity 14% Template c3btnA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein Resolution 2.05 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	I	A	P	D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	.	A	H	Q	G
Query Conservation																																																																													.
Alig confidence																												.	.													.														.																					.
Template Conservation																												.	.													.														.
Template Sequence		T	G	K	N	A	F	F	V	G	D	L	G	K	I	V	K	K	H	S	Q	W	Q	T	V	V	A	.	.	Q	I	K	P	F	Y	T	V	K	C	N	S	.	T	P	A	V	L	E	I	L	A	A	L	G	T	.	G	F	A	C	S	S	K	N	E	M	A	L	V	Q	E	L	G	V	S	P	E	N	I	I	F
Template Known Secondary structure		S	S																								T	.	.	T							G	G	G			.												T		.					S	S										T	T			G	G	G
Template Predicted Secondary structure																												.	.													.														.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P
Query Conservation
Alig confidence																																					.	.	.	.																		.	.	.	.	.	.																	.
Template Conservation																																					.	.	.	.																		.	.	.	.	.	.																	.
Template Sequence		T	S	P	C	K	Q	V	S	Q	I	K	Y	A	A	K	V	G	V	N	I	M	T	C	D	N	E	I	E	L	K	K	I	A	R	N	.	.	.	.	H	P	N	A	K	V	L	L	H	I	A	T	E	D	M	K	F	.	.	.	.	.	.	G	T	T	L	K	N	C	R	H	L	L	E	C	A	K	E	.	L
Template Known Secondary structure				S	S													T								S											.	.	.	.		T	T							B								.	.	.	.	.	.		B															.
Template Predicted Secondary structure																																					.	.	.	.																		.	.	.	.	.	.																	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	S	C	T	S	L	P	L	L	A	Q
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		D	V	Q	I	I	G	V	K	F	H	.	.	.	V	S	S	A	C	K	E	Y	Q	V	Y	V	H	A	L	S	D	A	R	C	V	F	D	M	A	G	E	F	G	F	T	M	N	M	L	D	I	G	G	G	F	T	G	T	E	I	Q	L	E	E	V	N	H	V	I	S	P	L	L	D	I	Y	F	P	E	G	S
Template Known Secondary structure		T										.	.	.			T	T				T	T																			T	T										S				S																				S		T	T	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		Y	G	V	T	H	A	E	P	G	H	A	L	T	G	T	I	P	A	N	Q	Q	G	D	Q	P	E	R	I	A	M	L	W	L	S	E	I	S	H	H	F	R	G	D	S	Y	.	.	.	.	.	.	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	T	E	T	N
Query Conservation																																															.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	Q	I	I	S	E	P	G	S	Y	Y	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	F	T	L	A	V	N	I	I	A	K	K	V	V	A	F	V	Y	Y	M	N	D	G	V	Y	G	S	F	A	S	K	L	S	T	I	P	E	V	H	K	K	P	L	F	T	S	S	L	W	G	P	S
Template Known Secondary structure										S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																				S			T	T	T	T	T	G	G	G	G																			T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.														.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	V	D	D	S	S	I	D	Y	T	L	P	L	A	G	E	F	P	V	S	S	A	V	V	L	C	F	R	T	Q	I	F	V	T	R	S	D	V	V	L	V	S	G	I	H	R	G	E	P	E	I	V	G	R	Y
Query Conservation
Alig confidence																.	.	.															.	.	.	.	.	.
Template Conservation																.	.	.															.	.	.	.	.	.
Template Sequence		C	D	E	L	D	Q	I	V	E	S	C	L	L	P	.	.	.	E	L	N	V	G	D	W	L	I	F	D	N	M	G	.	.	.	.	.	.	A	D	S	F	H	E	P	S	A	F	N	D	F	Q	R	P	A	I	Y	F
Template Known Secondary structure			S	T	T											.	.	.				T	T						S	S			.	.	.	.	.	.	S	S							G	G	G	T	T
Template Predicted Secondary structure																.	.	.															.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.							.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions