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Job DescriptionP45550
Confidence100.00%DateThu Jan 5 12:03:07 GMT 2012
Rank15Aligned Residues319
% Identity17%Templatec3anuA_
PDB info PDB header:lyaseChain: A: PDB Molecule:d-serine dehydratase; PDBTitle: crystal structure of d-serine dehydratase from chicken kidney
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
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Query Sequence  KIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGH
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Template Sequence  TLPTPALTIDRTTARRNAERMRERCRALGVRLRPHVKTHK. TLEGGLLATGGTRRGIAVSTLAEARFFADGGFDDILLAY
Template Known Secondary structure  GS
SST


B
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   910.........20.........30.........40........ .50.........60.........70.........80.......
 
   105.... 110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  LVQIP. . CHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQN.
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Template Sequence  PVPTARLEECAGLARRLDAFHVLLDRPEALASLRQRPLGHGKRWLVWLKLDCGRAGV. . . . . . RPTDPAALELAQAIAND
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GGGSS


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   88.90.........100.........110.........120.........130.........140.... .....150.........160.
 
   182.......190...... ...200.........210.........220.........230.........240.........250........
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Query Sequence  . LPGLHLAGLTHFPCL. . LWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHA
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Template Sequence  APEEVTLVGVYAHCGNTYCSGADTIQAIARTTTNAVLSFVAALRQAGVPCPQASIGSTPSCS. HPIPEMSQLTELHPGNY
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TTT

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   164.....170.........180.........190.........200.........210.........220..... ....230.........240..
 
   259260..... ....270.........280...... ...290.........300.........310.........320.........330.....
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Query Sequence  LTGTIPA. NQQGDQPERIAMLWLSEISHH. . FRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLP
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Template Sequence  IFYDLQQTQLGSCQPQDVAIRVLTRVIGHYAHRGQLLVDCGWAALSLHGAGGPQGCAAIDGHPELRLVGLTQEHGLLEHQ
Template Known Secondary structure  GT

TSS
GGG

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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   336...340.........350.
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Query Sequence  . LAGEFPVSSAVVLCFR
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Template Sequence  MDFGRFPVGSVLALIPY
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   330.........340......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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