Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 31 Aligned Residues 322 % Identity 10% Template c2nvaH_ PDB info PDB header:lyase Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine Resolution 1.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	W	Q	Q	G	K	I	A	P	D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P
Query Conservation
Alig confidence																																		.	.													.														.
Template Conservation																																		.	.													.														.
Template Sequence		S	V	V	N	N	I	L	Q	T	K	S	F	Y	V	S	S	P	K	I	V	E	D	L	I	D	Q	W	T	I	L	F	P	.	.	R	V	T	P	H	Y	A	V	K	C	N	N	.	D	E	V	L	L	K	T	M	C	D	K	N	V	.	N	F	D	C	A	S	S	S	E	I	K	K	V	I	Q	I	G	V	S
Template Known Secondary structure											S																						T	.	.	T							G	G	G			.											T	T		.						S											T
Template Predicted Secondary structure																																		.	.													.														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		99	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		V	A	.	H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A
Query Conservation				.
Alig confidence				.																																																												.	.
Template Conservation																																																																.	.
Template Sequence		P	S	R	I	I	F	A	H	T	M	K	T	I	D	D	L	I	F	A	K	D	Q	G	V	D	I	A	T	F	D	S	S	F	E	L	D	K	I	H	T	Y	H	P	N	C	K	M	I	L	R	I	R	C	D	D	P	N	A	T	V	Q	L	.	.	G	N	K	F	G	A	N	E	D	E	I	R	H	L	L	E
Template Known Secondary structure		G	G	G						S	S													T								S												T	T							B					T	T		S	B			.	.	T	T	T	S	S	B		G	G	G
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	Q	N	L	P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H
Query Conservation
Alig confidence							.											.	.	.																																																.	.
Template Conservation							.											.	.	.																																																.	.
Template Sequence		Y	A	K	Q	L	.	D	I	E	V	I	G	I	S	F	H	.	.	.	V	G	S	G	S	R	N	P	E	A	Y	Y	R	A	I	K	S	S	K	E	A	F	N	E	A	I	S	V	G	H	K	P	Y	I	L	D	I	G	G	G	L	H	A	D	I	G	E	.	.	L	S	T	M	S	D	Y	I	N	D	A	I
Template Known Secondary structure						T	.	T										.	.	.			B	S	B																								T												B							.	.
Template Predicted Secondary structure							.											.	.	.																																																.	.
Template SS confidence
		162	.	.	.	.		.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	T	G	T	I	P	A	N	Q	Q	G	D	Q	P	.	.	.	.	E	R	I	A	M	L	W	L	S	E	I	S	H	H	F	R	G	D	S	Y	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	T	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		K	D	F	F	P	E	D	T	V	T	I	V	A	E	P	G	R	F	F	A	E	H	Y	S	V	L	A	T	Q	V	I	G	K	R	.	.	.	.	V	R	D	G	L	Y	E	Y	F	F	N	E	S	T	Y	G	G	F	S	N	V	I	F	E	K	S	V	P	T	P	Q	L	L	R	D	V	P	D	D	E	E	Y
Template Known Secondary structure								T	T								S					G	G	G												.	.	.	.			T	T							S			T	T	T	T		T					S									S	S				T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
										321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	N	L	K	T	V	D	D	S	S	I	D	Y	T	L	P	L	A	G	E	F	P	V	S	S	A	V	V	L	C	F	R	T	Q	I	F	V	T	R	S
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.
Template Conservation																									.	.	.
Template Sequence		V	P	S	V	L	Y	G	C	T	C	D	G	V	D	V	I	N	H	N	V	A	L	P	.	.	.	E	L	H	I	G	D	W	V	Y	F	P	S	W	G	A	Y	T	N	V	L	T
Template Known Secondary structure									S	S	S		T	T											.	.	.				T	T						S	S			S	S	S	G	G	G
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions