Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 13 Aligned Residues 313 % Identity 17% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	.	.	.	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H	L
Query Conservation																																					.	.	.
Alig confidence																								.	.												.	.	.
Template Conservation																								.	.
Template Sequence		L	T	T	K	I	D	L	D	A	I	A	H	N	T	R	V	L	K	Q	M	A	G	.	.	P	A	K	L	M	A	V	V	K	A	N	A	Y	N	H	G	V	E	K	V	A	P	V	I	A	A	H	G	A	D	A	F	G	V	A	T	L	A	E	A	M	Q	L	R	D	I	G	I	S	Q	E	V	L	C	W	I
Template Known Secondary structure																							T	.	.	T	S												T	T											T	T	T																		T	T			S
Template Predicted Secondary structure																								.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L
Query Conservation
Alig confidence			.															.														.	.	.																						.	.	.	.	.	.
Template Conservation			.															.														.	.	.																						.	.	.	.	.	.
Template Sequence		W	.	T	P	E	Q	D	F	R	A	A	I	D	R	N	I	.	D	L	A	V	I	S	P	A	H	A	K	A	L	.	.	.	I	E	T	D	A	E	H	I	R	V	S	I	K	I	D	S	G	L	H	R	S	.	.	.	.	.	.	G	V	D	E	Q	E	W	E	G	V	F	S	A	L	A	A	A	P	H	I
Template Known Secondary structure			.		T	T	S							T	T	T		.						S								.	.	.		T				S								B			S	S		S	S	.	.	.	.	.	.	S	B																T	T
Template Predicted Secondary structure			.															.														.	.	.																						.	.	.	.	.	.
Template SS confidence
		82		.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L	T	G	T	I	P	A
Query Conservation
Alig confidence										.	.							.	.	.	.	.																																	.	.	.
Template Conservation										.	.							.	.	.	.	.																																	.	.	.
Template Sequence		E	V	T	G	M	F	T	H	.	.	L	A	C	A	P	E	.	.	.	.	.	T	D	R	Q	I	I	A	F	R	R	A	L	A	L	A	R	K	H	G	L	E	C	P	V	N	H	V	C	N	S	P	A	.	.	.	F	L	T	R	S	D	L	H	M	E	M	V	R	P	G	L	A	F	Y	G	L	E	P	V
Template Known Secondary structure										.	.							.	.	.	.	.																		T	T							B							.	.	.		T	T		G	G	G		T	T						G	G	G	G	T			S	S
Template Predicted Secondary structure										.	.							.	.	.	.	.																																	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.			.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320													.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		N	Q	Q	G	D	Q	P	E	R	I	A	M	L	W	L	S	E	I	S	H	H	F	R	G	D	S	Y	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	T	E	T	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	T	V	D	D	S	S	I	D	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence						.																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation						.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	L	E	.	H	G	L	K	P	A	M	T	W	E	A	K	V	S	V	V	K	Q	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	A	V	V	P	A	G	Y	A	D	G	M	P	R	H	A	Q	G	K	F	S	V	T	I	D	G	L	D	Y	P	Q	V	G	R	V	C	M	D	Q	F
Template Known Secondary structure		T	T			.																					.	.	.	.	.	.	.	.	.	.	.	.	.							S			G	G	G	T			G	G	G	T	T	T						T	T							S				S	S
Template Predicted Secondary structure						.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.														250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
				332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																										.	.	.	.
Query SS confidence		.	.																										.	.	.	.
Query Sequence		.	.	Y	T	L	P	L	A	G	E	F	P	V	S	S	A	V	V	L	C	F	R	T	Q	I	F	V	.	.	.	.	T	R	S	D	V	V	L	V	S	G	I	H	R	G	E	P	E	I	V	G	R	Y
Query Conservation		.	.																										.	.	.	.
Alig confidence		.	.																										.	.	.	.
Template Conservation
Template Sequence		V	I	S	L	G	D	N	P	H	G	V	E	A	G	A	K	A	V	I	F	G	E	N	G	H	D	A	T	D	F	A	E	R	L	D	T	I	N	Y	E	V	V	C	R	P	T	G	R	T	V	R	A	Y
Template Known Secondary structure							T		T	T				T	T							S	T	T	S										T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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