Job Description P45550 Confidence 22.40% Date Thu Jan 5 12:03:07 GMT 2012 Rank 178 Aligned Residues 182 % Identity 13% Template c2bmbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:folic acid synthesis protein fol1; PDBTitle: x-ray structure of the bifunctional 6-hydroxymethyl-7,8-2 dihydroxypterin pyrophosphokinase dihydropteroate synthase3 from saccharomyces cerevisiae Resolution 2.3 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.								.
Query SS confidence																																																								.	.	.	.	.								.
Query Sequence		V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	.	.	.	.	.	A	R	V	M	R	R	A	.	G	L	P	V	A	H	Q	G	H	L	V	Q	I
Query Conservation																																																								.	.	.	.	.								.
Alig confidence																														.	.																									.	.	.	.	.								.								.
Template Conservation																														.	.																																													.
Template Sequence		I	R	R	S	I	P	L	I	K	A	I	R	E	S	T	E	L	P	Q	D	K	V	I	L	S	I	D	T	.	.	Y	R	S	N	V	A	K	E	A	I	K	V	G	V	D	I	I	N	D	I	S	G	G	L	F	D	S	N	M	F	A	V	I	A	E	N	P	E	I	C	Y	I	L	S	.	H	T	R	G	D
Template Known Secondary structure																S	S	S		G	G	G								.	.												T	T							T	T	T	T	S	S		T	T							T		T	T	S						.				S
Template Predicted Secondary structure																														.	.																																													.
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.			.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.																															.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.							.
Template Conservation					.	.	.	.	.																																																																	.							.
Template Sequence		I	S	T	.	.	.	.	.	M	N	R	L	A	H	Y	E	N	F	A	L	G	D	S	I	Q	Q	E	F	V	H	N	T	D	I	Q	Q	L	D	D	L	K	D	K	T	V	L	I	R	N	V	G	Q	E	I	G	E	R	Y	I	K	A	I	D	N	G	V	K	R	W	Q	I	L	.	I	D	P	G	L	G	.
Template Known Secondary structure		T	T	T	.	.	.	.	.	G	G	G					S	S		T	T	T	T	T							T	T			G	G	G	S	T	T																									T	T			G	G	G			.					T	T	.
Template Predicted Secondary structure					.	.	.	.	.																																																																	.							.
Template SS confidence
		687	.	.						690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.		.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	A	G	L	T	H	F	P	C	L	L	W	.	.	.	.	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	A	K	T	W	K	Q	N	L	Q	I	I	R	H	I	P	I	L	K	N	Y	S	F	T	M	N	S	N	N	S	Q	V	Y	V	N	L	R	N	M	P	V	L	L	G	P	S	R	K	K	F	I	G	H	I	T	K	D	V	D	A	K	Q	R	D	F	A	T	G	A	V	V	A	S	C
Template Known Secondary structure		.	.	.	.	.	.	S	S												T					T	T								T	T								T	T			B					T	T									T			S	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
		222	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	G	I	A	L	E	Q	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	F	G	S	D	M	V	R	V	H
Template Known Secondary structure				T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		834	.	.	.	.	.	840	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions