Job Description P45550 Confidence 61.17% Date Thu Jan 5 12:03:07 GMT 2012 Rank 103 Aligned Residues 167 % Identity 14% Template c2b7pA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori Resolution 2.51 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	.	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H	L	V	Q	I	P	C	H	Q	V
Query Conservation																																											.
Alig confidence																																											.						.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		S	S	G	I	A	T	L	T	S	R	F	V	E	A	L	N	S	H	K	V	R	L	L	D	T	R	K	T	R	P	L	L	R	I	F	E	K	Y	S	V	L	N	G	G	A	S	N	.	.	.	.	.	.	.	.	.	.	.	.	H	R	L	G	L	D	D	A	L	M	.	.	.	.	.	L	K	D	T	H	L
Template Known Secondary structure																			S	S	S						S				T	T												T	T		B		.	.	.	.	.	.	.	.	.	.	.	.			S	S	T	T	T				.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.													.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G	L	T	H	F
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		R	H	V	.	.	.	.	.	.	.	.	.	.	.	.	K	D	L	K	S	F	L	T	H	A	R	K	N	L	P	F	T	A	K	I	E	I	E	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	E	E	A	K	N	A	M	N	A	.	.	.	.	.	G	A	D	I	V	M	C	D	N	L
Template Known Secondary structure		T	T		.	.	.	.	.	.	.	.	.	.	.	.	S										G	G	G	S		T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											.	.	.	.	.	T		S						S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		163	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190															.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L	T	G	T	I	P	A	N
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	E	T	K	E	I	A	A	Y	R	D	A	H	Y	P	F	V	L	L	E	A	S	G	N	I	.	S	L	E	S	I	N	A	Y	A	K	S	G	V	D	A	I	S	V	G	A	L	I	H	Q	A	T	F	I	D
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S		T	T	S						S	S		.		T	T	T						T	T	T		S					T					T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		212																	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions