Job Description P45550 Confidence 53.37% Date Thu Jan 5 12:03:07 GMT 2012 Rank 114 Aligned Residues 184 % Identity 15% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	.	.	.	.	.	.	.	.	.	.	K	E	A	R	V	M	R	R	A	G	L	P	V	A	H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	I	N	R	L	S	D	C	G	Y	A	R	I	E	A	T	S	F	V	S	P	K	W	V	P	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A
Template Known Secondary structure								T	T	T	T		S								S		T	T	T		G	G	G	T	T								S				S	S	S							S	S										T	T		S								S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
									127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																																	.
Query SS confidence		.	.	.	.	.	.	.																																																																	.
Query Sequence		.	.	.	.	.	.	.	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	Q	E	S	G	F	A	L	K	V	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G	L	.	T	H	F	P	C	L	L	W
Query Conservation		.	.	.	.	.	.	.																																																																	.
Alig confidence		.	.	.	.	.	.	.																																		.	.	.	.	.																			.								.				.	.	.	.	.
Template Conservation																																										.	.	.	.	.																			.												.	.	.	.	.
Template Sequence		N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	.	.	.	.	.	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	.	G	C	H	E	V	S	L	G	D	T	I	.	.	.	.	.
Template Known Secondary structure			T	S	S																			T	T										S	S			T	T	T	.	.	.	.	.																			.	T		S							T	T	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.																			.												.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V	T	H	A	E	P	G	H	A	L	T	G	T	I	P	A	N	Q
Query Conservation
Alig confidence		.	.	.	.																																												.
Template Conservation		.	.	.	.																																												.
Template Sequence		.	.	.	.	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	.	E	K	G	L	R	V	F	D	A	S	V	G	G	L	G	G	C	P	F	A	P
Template Known Secondary structure		.	.	.	.	S																T	T	S		G	G	G						B		T	T	S											.			T							B	T	T			S		B	T	T	B	T
Template Predicted Secondary structure		.	.	.	.																																												.
Template SS confidence
						179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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