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Job DescriptionP45550
Confidence100.00%DateThu Jan 5 12:03:07 GMT 2012
Rank8Aligned Residues326
% Identity16%Templatec1xfcB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:alanine racemase; PDBTitle: the 1.9 a crystal structure of alanine racemase from mycobacterium2 tuberculosis contains a conserved entryway into the active site
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DSWVIDVDQILENGKRLIETARLYGIELYLMTKQF. . . GRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHL
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Template Sequence  AEAMVDLGAIEHNVRVLREHAG. . HAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWL
Template Known Secondary structure  T..TS
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Query Sequence  VQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGL
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Template Sequence  H. PPGIDFGPALLADV. QVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVG. . . PAQFPAMLTALRQAMAEDAV
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Query Sequence  HLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPA
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Template Sequence  RLRGLMSH. . MVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSA. . . TMARPDLTFDLVRPGIAVYGLSPV
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Query Sequence  NQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITET. . . . . . . . . . . . NLKTVDDSSID. .
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Template Sequence  PALGDMGLVPAMTVKCAVALVKSI. . . . . . . . . . . . RDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQF
Template Known Secondary structure  GGG
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Query Sequence  . . YTLPLAGEFPVSSAV. VLCFRTQIFVTRSDVVLVSG. . . . . . IHRGEPEIVGRY
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Template Sequence  MVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY
Template Known Secondary structure  SSS



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   323......330.........340.........350.........360.........370........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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