Job Description P45550 Confidence 100.00% Date Thu Jan 5 12:03:07 GMT 2012 Rank 30 Aligned Residues 336 % Identity 13% Template c1tufA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi Resolution 2.40 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																															.	.	.	.	.																																														.
Query SS confidence																															.	.	.	.	.																																														.
Query Sequence		A	P	D	S	W	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	E	.	.	.	.	.	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E	K	L	L	A	L	G	Y	S	G	I	V	A	V	D	Y	K	E	A	R	V	M	R	R	A	G	L	P	V	A	.
Query Conservation																															.	.	.	.	.																																														.
Alig confidence																															.	.	.	.	.										.														.																						.
Template Conservation																																													.														.
Template Sequence		G	T	P	L	Y	V	M	S	E	E	Q	I	K	I	N	Y	N	R	Y	I	E	A	F	K	R	W	E	E	E	T	G	K	E	F	I	V	A	Y	A	Y	A	N	A	.	N	L	A	I	T	R	L	L	A	K	L	G	C	.	G	A	D	V	V	S	G	G	E	L	Y	I	A	K	L	S	N	V	P	S	K	K
Template Known Secondary structure			S	S																					T	T					S														.											T	T		.						S										T	T			G	G	G
Template Predicted Secondary structure																																													.														.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.										.
Query SS confidence																																																																.	.	.	.	.	.	.	.										.
Query Sequence		H	Q	G	H	L	V	Q	I	P	C	H	Q	V	A	D	A	V	E	Q	G	T	D	V	I	T	V	F	T	L	D	K	A	R	E	V	S	A	A	A	V	K	A	G	R	I	Q	S	V	L	L	K	V	Y	S	D	D	D	F	L	Y	P	G	.	.	.	.	.	.	.	.	Q	E	S	G	F	A	L	K	V	.
Query Conservation																																																																.	.	.	.	.	.	.	.										.
Alig confidence																																																																.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		I	V	F	N	G	N	C	K	T	K	E	E	I	I	M	G	I	E	A	N	I	R	A	F	N	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	G	L	D	V	E	S	G
Template Known Secondary structure							S													T	T		S																					T								B							T	T	T	S										S	S		S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	P	E	I	V	A	E	I	Q	N	L	P	G	L	H	L	A	G	L	T	H	F	P	C	L	L	W	D	E	A	V	G	K	V	L	P	T	P	N	L	H	T	L	I	Q	A	R	D	Q	L	A	K	S	G	I	A	L	E	Q	L	N	A	P	S	A	T	S	C	T	S	L	P	L	L	A	Q	Y	G	V
Query Conservation		.
Alig confidence		.																							.	.	.																																											.	.	.	.	.	.	.
Template Conservation																									.	.	.																																											.	.	.	.	.	.	.
Template Sequence		I	A	M	K	A	I	K	M	A	L	E	M	E	Y	V	N	V	V	G	V	H	C	H	.	.	.	I	G	S	Q	L	T	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E	L	K	E	E	G	I	E	I	E	D	V	N	L	G	G	G	L	G	.	.	.	.	.	.	.	I	P	Y	Y	K
Template Known Secondary structure												T		S	S										.	.	.			S	S	B																						T	T	T				S								B		.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																									.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.								.	.	.	270	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.														.	.	.																																			.	.	.	.	.	.	.
Query SS confidence																								.														.	.	.																																			.	.	.	.	.	.	.
Query Sequence		T	H	A	E	P	G	H	A	L	T	G	T	I	P	A	N	Q	Q	G	D	Q	P	.	E	R	I	A	M	L	W	L	S	E	I	S	H	.	.	.	H	F	R	G	D	S	Y	C	Y	G	G	G	Y	Y	R	R	G	H	A	Q	H	A	L	V	F	T	P	E	N	Q	K	I	T	E	.	.	.	.	.	.	.
Query Conservation																								.														.	.	.																																			.	.	.	.	.	.	.
Alig confidence																								.														.	.	.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	Q	I	P	T	Q	K	D	L	A	D	A	I	I	N	T	M	L	K	Y	K	D	K	V	E	M	P	N	L	I	L	E	P	G	R	S	L	V	A	T	A	G	Y	L	L	G	K	V	H	H	I	K	E	T	P	V	T	K	W	V	M	I	D	A	G	M	N	D	M	M	R	P	A	M	Y	E	A	Y	H
Template Known Secondary structure		S	S																		T	T	T	T	T	S										S					G	G	G														S	S							S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
																		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	L	K	T	V	D	D	S	S	I	D	Y	T	L	P	L	A	G	E	F	P	V	S	S	A	V	V	L	C	F	R	T	Q	I	F	V	T	R	S	D	V	V	L	V	S	G	I	H	R	G	E	P	E	I	V	G	R	Y	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																						.	.							.	.
Template Conservation																																					.																						.	.							.	.
Template Sequence		H	I	I	N	C	K	V	K	N	E	K	E	V	V	S	I	A	G	G	L	C	E	S	S	D	V	F	G	R	D	R	E	L	D	K	.	V	E	V	G	D	V	L	A	I	F	D	V	G	A	Y	G	I	S	M	A	N	.	.	N	Y	N	A	R	G	.	.	R	P	R	M	V	L	T	S	K
Template Known Secondary structure						S	B			S										S	S	S		T	T												.			T	T									S	S	S	S	G	G	G			.	.		T	T	T			.	.									T
Template Predicted Secondary structure																																					.																						.	.							.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.			.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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