Job Description P45550 Confidence 64.52% Date Thu Jan 5 12:03:07 GMT 2012 Rank 99 Aligned Residues 81 % Identity 21% Template c1k1yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase2 complexed with acarbose Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																												.	.					.	.	.	.	.	.																								.	.
Query SS confidence																												.	.					.	.	.	.	.	.																								.	.
Query Sequence		F	V	E	A	L	K	R	Q	N	P	A	L	I	S	A	A	L	S	L	W	Q	Q	G	K	I	A	.	.	P	D	S	W	.	.	.	.	.	.	V	I	D	V	D	Q	I	L	E	N	G	K	R	L	I	E	T	A	R	L	Y	G	I	.	.	E	L	Y	L	M	T	K	Q	F	G	R	N	P	W	L	A	E
Query Conservation																												.	.					.	.	.	.	.	.																								.	.
Alig confidence																												.	.					.	.	.	.	.	.																								.	.								.
Template Conservation																																																																								.
Template Sequence		L	L	E	W	I	E	E	N	K	P	D	Y	L	D	L	L	R	S	L	I	K	R	G	Q	L	E	I	V	V	A	G	F	Y	E	P	V	L	A	A	I	P	K	E	D	R	L	V	Q	I	E	M	L	K	D	Y	A	R	K	L	G	Y	D	A	K	G	V	W	L	T	E	.	R	V	W	Q	P	E	L	V	K
Template Known Secondary structure																							T	T						B			T	T		B		G	G	G	S																			T	T									G	G	.	G				T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.
		72	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	A	L	G	Y	S	G	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	R	E	A	G	I	E	Y	V	V	V
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions