Job Description P0A6B7 Confidence 99.91% Date Wed Jan 25 15:20:14 GMT 2012 Rank 191 Aligned Residues 349 % Identity 15% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y
Query Conservation
Alig confidence																.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																			.	.																				.	.	.	.
Template Conservation																.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																			.	.																				.	.	.	.
Template Sequence		G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	F	S	G	.	.	.	.	.	.	.	.	.	.	.	.	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	.	.	.
Template Known Secondary structure		T		S										T	T	.	.	.	S					S	S	S	.	.	.	.	.	.	.	.	.	.	.	.															T			S	.	.							S	S	T	T	T									.	.	.	.
Template Predicted Secondary structure																.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																			.	.																				.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.													.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150
Predicted Secondary structure																	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	.	.	.	.	.	.	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	.	.	.	.	.	.	.	.	.	.	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	.	.	.	.	D	T	I	L	V	S	I
Query Conservation																	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A
Template Known Secondary structure													T	T	T						S	S												T	T							B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		151	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	H	V	N	N	E	I	G	.	.	.	.	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	M	S	F	S	G	H	K	I	Y	G
Query Conservation										.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M
Template Known Secondary structure			S	S	B		G	G	G		B																	T	T								T	T													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		P	K	G	I	G	A	L	Y	V	R	.	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y
Query Conservation												.
Alig confidence												.																																											.	.
Template Conservation																																																							.	.
Template Sequence		V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	Q
Template Known Secondary structure			S	S								S	G	G	G													T	T	S	S																					T	T		.	.																					T	T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.
Predicted Secondary structure																.	.	.	.																																																												.
Query SS confidence																.	.	.	.																																																												.
Query Sequence		L	N	G	D	L	E	H	G	A	P	N	I	L	N	.	.	.	.	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	.	T	E
Query Conservation																.	.	.	.																																																												.
Alig confidence		.	.	.	.											.	.	.	.																																																												.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q
Template Known Secondary structure		.	.	.	.				S	S										S	T	T	S		G	G	G																						S						B		T	T	T		S	B				S										T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D	L	S	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N	I	K	G	L
Template Known Secondary structure																	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions