Job Description P0A6B7 Confidence 99.84% Date Wed Jan 25 15:20:14 GMT 2012 Rank 223 Aligned Residues 323 % Identity 13% Template d2a7va1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.04

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	.	.	.	.	G	A	T	E	S	D	N	L	A	I	K	G
Query Conservation																																																																		.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.																							.					.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		A	S	E	N	F	C	S	R	A	A	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q	.	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	L	A	V	Y	T	A
Template Known Secondary structure		T	T													T	S	G	G	G	T						.	.	.	.	.	.	.	.	.	.	.	.		T														T	T			T	T	T	.								S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.													.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A
Query Conservation
Alig confidence			.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation			.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		L	.	.	.	.	L	Q	P	H	D	R	I	M	G	Y	K	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	G	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P	R	L	I	I	A	G	T	S	A	.	Y	A	R	L	I	D	Y	A	R
Template Known Secondary structure			.	.	.	.			S									B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	B															S							S	S	.			S
Template Predicted Secondary structure			.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		138					.	140	.	.	.	.	.	.	.	.	.	150	.	.																								.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	.	.	.	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	I	G	A	L	Y	V	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	R	V	R	I	E
Query Conservation																													.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	E	V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I	P	S	P	F	K	H	A	D	I	V	T	T	T	T	H	K	T	L	R	G	A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N
Template Known Secondary structure									T	T								G	G	G						T	T	S	S			G	G	G	T		S						S	S	G	G	G		S		S									S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	.	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N
Query Conservation																																				.
Alig confidence												.	.	.	.	.	.																			.																							.
Template Conservation												.	.	.	.	.	.																																										.
Template Sequence		F	A	V	F	P	S	L	Q	G	G	.	.	.	.	.	.	P	H	N	H	A	I	A	A	V	A	V	A	L	K	Q	A	C	T	P	M	F	R	E	Y	S	L	Q	V	L	K	N	A	R	A	M	A	D	A	L	L	E	.	R	G	Y	S	L	V	S	G	G	T	D	N	H	L	V	L	V	D	L	R	P	K
Template Known Secondary structure					T	T	T	T			S	.	.	.	.	.	.																		S																								.	T	T				G	G	G	S		S	S	S							T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.																																										.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	.	.	.	.	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D
Query Conservation																																																						.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	D	G	A	R	A	E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	G	D	.	.	.	.	.	.	.	.	.	.	.	.	R	S	A	I	T	P	G	G	L	R	L	G	A	P	A	L	T	S	R	Q	F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G	V	N	I	G	L	E
Template Known Secondary structure		T													T	T									T	T		.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		S						S						T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.													400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		383	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	L	W	E	M	Y	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	S	K	T	A	K	L	Q	D
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions