Job Description P0A6B7 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 26 Aligned Residues 340 % Identity 21% Template d1vjoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.70

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		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																																																													.
Query SS confidence						.	.																																																													.
Query Sequence		M	K	L	P	.	.	I	Y	L	D	Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	.	D	P	R	E	I	V	F	T	S	G	A	T	E
Query Conservation						.	.																																																													.
Alig confidence						.	.				.																			.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation											.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	V	P	S	R	L	L	L	.	G	P	G	P	S	N	A	H	P	S	V	L	Q	A	X	N	V	S	.	.	.	.	.	.	.	.	.	.	.	.	P	V	G	H	L	D	P	A	F	L	A	L	X	D	E	I	Q	S	L	L	R	Y	V	W	Q	T	E	N	P	L	T	I	A	V	S	G	T	G	T	A
Template Known Secondary structure											.	S	S	S													S	S		.	.	.	.	.	.	.	.	.	.	.	.				T	T	S																			T				S						S	S
Template Predicted Secondary structure											.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	.	I	L	V	S	I	M	H	V	N	N	E
Query Conservation																																																																						.
Alig confidence											.	.	.	.																			.																																					.
Template Conservation											.	.	.	.																			.
Template Sequence		A	X	E	A	T	I	A	N	A	.	.	.	.	V	E	P	G	D	V	V	L	I	G	V	A	G	Y	F	G	N	R	.	L	V	D	X	A	G	R	Y	G	A	D	V	R	T	I	S	K	P	W	G	E	V	F	S	L	E	E	L	R	T	A	L	E	T	H	R	P	A	I	L	A	L	V	H	A	E	T	S
Template Known Secondary structure											.	.	.	.			T	T								S	S						.								T	T										T	T																		S						S			T	T
Template Predicted Secondary structure											.	.	.	.																			.
Template SS confidence
		85	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																					.																												.
Query SS confidence																																																					.																												.
Query Sequence		I	G	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	.	Y	G	P	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	.
Query Conservation																																																					.																												.
Alig confidence																																																					.																												.
Template Conservation
Template Sequence		T	G	A	R	Q	P	L	E	G	V	G	E	L	C	R	E	F	G	T	L	L	L	V	D	T	V	T	S	L	G	G	V	P	I	F	L	D	A	W	G	V	D	L	A	Y	S	C	S	Q	K	G	L	G	C	S	P	G	A	S	P	F	T	X	S	S	R	A	I	E	K	L	Q	R	R	R	T	K	V	A	N
Template Known Secondary structure		T	T						T	T									T								T	T	T	T	T	T	S				T	T	T	T	T		S						S	S	S	T	T		S		S	S																T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
														235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	.	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		W	Y	L	D	X	N	L	L	G	K	Y	W	G	S	E	R	V	Y	H	H	T	A	P	I	N	L	Y	Y	A	L	R	E	A	L	R	L	I	A	Q	E	G	L	A	N	C	W	Q	R	H	Q	K	N	V	E	Y	L	W	E	R	L	E	D	I	G	L	S	L	H	V	E	K	E	Y	R	L	P	T	L	T	T
Template Known Secondary structure		S	T	T										S	T	T					S																																											T	T			B	S	S		G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																									.
Query SS confidence																		.	.	.																																									.
Query Sequence		N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	.	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	.	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I
Query Conservation																		.	.	.																																									.
Alig confidence																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	C	I	P	D	G	V	D	G	K	A	V	A	R	R	L	L	N	E	H	N	I	E	V	G	G	G	L	G	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	K	V	W	R	V	G	L	X	G	F	N	S	R	K	E	S	V	D	Q	L	I	P	A	L	E	Q	V	L
Template Known Secondary structure						T	T																							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								G	G	G		S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																				.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions