Job Description P0A6B7 Confidence 99.92% Date Wed Jan 25 15:20:14 GMT 2012 Rank 176 Aligned Residues 342 % Identity 16% Template d1sffa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.90

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		6	.	.							.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																																										.
Query SS confidence					.	.	.	.	.	.																																																										.
Query Sequence		Y	L	D	.	.	.	.	.	.	Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	.	P	R	E	I	V	F	T	S	G	A	T	E	S
Query Conservation					.	.	.	.	.	.																																																										.
Alig confidence					.	.	.	.	.	.																																.	.	.	.	.	.	.	.																			.
Template Conservation																																										.	.	.	.	.	.	.	.
Template Sequence		Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	.	.	.	.	.	.	.	.	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A
Template Known Secondary structure					S	S					T		T	T		B	T												T	T	T		S				T	T	T	S		.	.	.	.	.	.	.	.															S	S		S	S								S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.													.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence								.																																		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation								.
Template Sequence		V	E	N	A	V	K	.	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N
Template Known Secondary structure								.							T								T	T					S	S							S	S			T	T	T	T	T	T	S					S	S								B	G	G	G	T	B
Template Predicted Secondary structure								.
Template SS confidence
		115	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
					142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.																						.	.	.	.																									.	.	.
Query SS confidence		.	.	.																						.	.	.	.																									.	.	.
Query Sequence		.	.	.	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	.	.	.	.	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	.	.	.	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K
Query Conservation		.	.	.																						.	.	.	.																									.	.	.
Alig confidence		.	.	.																						.	.	.	.																									.	.	.
Template Conservation
Template Sequence		D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G
Template Known Secondary structure		T			G	G	G								S	B		T	T	T	T	S		B																	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	S			S						G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		212		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N
Query Conservation			.
Alig confidence			.																											.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	.	.	.	.	.	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V
Template Known Secondary structure		S													T	T	S		T	T	S	S			S	S	S	S		.	.	.	.	.																	T	T																						T		T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.								310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	.	.	.	.	.	.	.	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E
Query Conservation																					.	.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D
Template Known Secondary structure		.	.				T	T							B	G	G	G		T	T	S	B															T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T	S									T	T
Template Predicted Secondary structure		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.																				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E	A	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions