Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6B7
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank10Aligned Residues348
% Identity21%Templated1qz9a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  IYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIK
Query Conservation 



 
        
 

                                
  

   
     
     

 
   

 
Alig confidence 





























...














































Template Conservation   

     
  
  
  
            ...                 
   
   
     
      


      
Template Sequence  IYLDGNSLGARPVAALARAQAVIAEEWGNG. . . LIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLS
Template Known Secondary structure 

TTTS


BTTT




...GGGTSGGGTTTT

TTS
S
Template Predicted Secondary structure 











...














Template SS confidence 















































































   30.........40.........50......... 60.........70.........80.........90.........100......
 
   85. ...90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure  ...







































Query SS confidence 

. . .










































































Query Sequence  GA. . . ANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQ
Query Conservation    ...          
        
              
                                        
Alig confidence 

...









































....




























Template Conservation              

 

       
                      ....  
 
  

   
  
         
   
Template Sequence  AALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVD. . . . SPEELPQAIDQDTAVVMLTHVNYKTGYMH
Template Known Secondary structure  STT

TTS

SS
S....SGGG
STTSB
TTT
BB
Template Predicted Secondary structure 


















....













Template SS confidence 















































































   107..110.........120.........130.........140.........150... ......160.........170.........180..
 
   162.......170.........180.........190.........200........ .210.........220.........230....
Predicted Secondary structure 





















..









.....
Query SS confidence 














































. .

























. . . . .
Query Sequence  DIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIY. . GPKGIGALYVRRKPRVRIEAQMHGGG. . . . .
Query Conservation   
                
                      
  
  ..   
 
                    .....
Alig confidence 














































..

























.....
Template Conservation      
             
                 
    
  
    

 
 
 
               
       
Template Sequence  DMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQ
Template Known Secondary structure 
T

TTTTTTS


T
S
SSSTT


TT



TTTTTTS

S


GGGB
TT
Template Predicted Secondary structure 


















































Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   235....240.........250..... ....260.........270.........280....... ..290.........300
Predicted Secondary structure  ...........








.






..








Query SS confidence  . . . . . . . . . . .




















.































. .












Query Sequence  . . . . . . . . . . . HERGMRSGTLPVHQIVGMGEA. YRIAKEEMATEMERLRGLRNRLWNGIKDIEEV. . YLNGDLEHGAPNI
Query Conservation  ...........       

       
    .                         
      ..             
Alig confidence  ...........




















.































..












Template Conservation                                
                   
   
   
       
     
       
Template Sequence  FAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRG
Template Known Secondary structure  S


SS

B
SSGGGG

S


TTS
TTS


S
SSGGGB
Template Predicted Secondary structure 

































Template SS confidence 















































































   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   301........310.........320.........330.........340.........350....... ..360.........370.........
Predicted Secondary structure 






















.




Query SS confidence 
























































.





















Query Sequence  LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSL. GRFTTEEEIDYTIELVRKSIGR
Query Conservation              
   
    
  
                           



 .    
 



  
  
   
  
Alig confidence 























.....................











.





















Template Conservation    
         
   
   

  .....................       

 
      
 



  
  
   
  
Template Sequence  SHVSFEHPEGYAVIQALIDRGVIG. . . . . . . . . . . . . . . . . . . . . DYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR
Template Known Secondary structure  S
TTTTT
.....................TTT

TTT

Template Predicted Secondary structure 




.....................










Template SS confidence 















































































   343......350.........360...... ...370.........380.........390.........400.
 
   380
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   402
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions