Phyre 2 alignment of P0A6B7 with d1fg7a

Job Description P0A6B7
Confidence 99.94% Date Wed Jan 25 15:20:14 GMT 2012

Rank 132 Aligned Residues 284

% Identity 15% Template d1fg7a_

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 1.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	.	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G
Query Conservation																																												.
Alig confidence																																				.	.	.	.					.																							.	.	.
Template Conservation																																				.	.	.	.																												.	.	.
Template Sequence	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	.	.	.	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	X	Y	S	V	S	A	E	T	I	G	V	.	.	.	E	C	R	T	V	P	T	L	D	N	W
Template Known Secondary structure												T	S		G	G	G					S														.	.	.	.			T	T	T							S	S	S		T										T		.	.	.									T	T	S
Template Predicted Secondary structure																																				.	.	.	.																												.	.	.
Template SS confidence
	61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.

	131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																		.	.																																					.	.	.
Query SS confidence																		.	.																																					.	.	.
Query Sequence	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	.	.	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	.	.	.	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H
Query Conservation																		.	.																																					.	.	.
Alig confidence																		.	.																																					.	.	.
Template Conservation
Template Sequence	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S
Template Known Secondary structure									T	S		T	T								S	S		T	T	T																	T	T	T								T	T	G	G	G	S	G	G	G		S	G	G	G	T	T	T		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
	134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

	206	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence	K	I	Y	G	P	K	G	.	.	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D
Query Conservation								.	.
Alig confidence								.	.																						.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	X	K	V	I	A	P	Y	.	.	.	.	.	.	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	X	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E
Template Known Secondary structure	S	T	T			G	G	G																			S		S	S	.	.	.	.	.	.	.	.		S												T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
	214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

	284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E
Query Conservation
Alig confidence													.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation													.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence	I	P	C	V	E	Q	V	F	D	S	E	T	.	.	.	N	Y	I	L	A	R	F	K	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R
Template Known Secondary structure	S	T	T								S	S	.	.	.	S							T	T											T	T							T	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T								.	.	.
Template Predicted Secondary structure													.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
	286	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																			.	330	.	.	.	.	.	.	.	.	.				340	.

	364	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	E	I	D	Y	T	I	E	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	E	S	Q	R	V	I	D	A	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	342	.	.	.	.	.	.	.	350	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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