Job Description P0A6B7 Confidence 99.90% Date Wed Jan 25 15:20:14 GMT 2012 Rank 199 Aligned Residues 360 % Identity 16% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	L	D	Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K
Query Conservation
Alig confidence															.																			.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation															.																			.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		I	Y	I	D	L	L	T	D	S	G	T	N	A	.	M	S	D	K	Q	W	A	G	M	M	I	G	D	E	A	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	S	E	N	F	Y	H	L	E	K	T	V	K	E	L	F	G	F	.	.	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q
Template Known Secondary structure			S				S		S	S	S				.									T	T	S					S	S	S	.	.	.	.	.	.	.	.	.	.	.																		.	.	S						S	S
Template Predicted Secondary structure															.																			.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.												.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	.	.	.	.	.	.	.	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	.	.	.	.	V	S	I	M	H	V
Query Conservation																																									.	.	.	.	.	.	.																									.	.	.	.
Alig confidence				.	.	.	.										.																								.	.	.	.	.	.	.																									.	.	.	.
Template Conservation				.	.	.	.										.
Template Sequence		L	A	.	.	.	.	I	K	P	G	Q	Y	V	A	G	.	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	D	L	N	K	L	A	T	L	I	K	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T
Template Known Secondary structure				.	.	.	.			T	T						.	S	S												T	T							B		G	G	G	G		T	T				S		T	T		B														G	G	G								S	S
Template Predicted Secondary structure				.	.	.	.										.
Template SS confidence
		109	110					.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		154	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	E	I	G	.	.	.	.	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G
Query Conservation							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I
Template Known Secondary structure		B	T	T	T	T	S	B																		T								T	T												S	T	T		T	T	S											T	T		S						T	T	T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D
Query Conservation
Alig confidence																																																		.	.	.
Template Conservation																																																		.	.	.
Template Sequence		G	G	F	L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	.	.	.	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	R	E	A	G	V	P	I	V	E	P	T
Template Known Secondary structure								S																T			T	T	T	T	T																	T		.	.	.																					T	T			B		S	S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																													.
Query SS confidence																											.	.																																													.
Query Sequence		L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	.	T	E	E	E	I	D	Y	T
Query Conservation																											.	.																																													.
Alig confidence																											.	.																																													.
Template Conservation
Template Sequence		G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V
Template Known Secondary structure			S	S											T	T	S		G	G	G															S							S						B		S	S	S			B				S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	L	V	R	K	S	I	G	R	L	R	D	L	S	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	G	I	I	K	L	Y	Q	H	K	E	D	I	R	G	L
Template Known Secondary structure										T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions