Job Description P0A6B7 Confidence 99.90% Date Wed Jan 25 15:20:14 GMT 2012 Rank 200 Aligned Residues 325 % Identity 13% Template c3pj0D_ PDB info PDB header:lyase Chain: D: PDB Molecule:lmo0305 protein; PDBTitle: crystal structure of a putative l-allo-threonine aldolase (lmo0305)2 from listeria monocytogenes egd-e at 1.80 a resolution Resolution 1.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G
Query Conservation
Alig confidence																															.	.	.	.	.	.																			.	.																						.	.
Template Conservation																															.	.	.	.	.	.																			.	.																						.	.
Template Sequence		N	G	P	R	N	V	G	V	L	T	E	A	L	Q	N	I	D	D	N	L	E	S	D	I	Y	G	N	G	A	.	.	.	.	.	.	V	I	E	D	F	E	T	K	I	A	K	I	L	G	K	Q	S	A	.	.	V	F	F	P	S	G	T	X	A	Q	Q	I	A	L	R	I	W	A	D	R	K	.	.	E	N
Template Known Secondary structure		S	S			S								T	T	T	S		T	T					B	T	T	B	S		.	.	.	.	.	.														T		S			.	.				S																		.	.	T
Template Predicted Secondary structure																															.	.	.	.	.	.																			.	.																						.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	.	.	.	V	V	Q	D	I	A	A	I	G	E	M	C	R
Query Conservation																																																																		.	.	.
Alig confidence																																	.																																	.	.	.
Template Conservation																																	.
Template Sequence		R	R	V	A	Y	H	P	L	S	H	L	E	I	H	E	Q	D	G	L	K	E	L	Q	Q	I	T	P	L	L	L	G	.	T	A	N	Q	L	L	T	I	D	D	I	K	S	L	R	E	P	V	S	S	V	L	I	E	L	P	Q	R	E	I	G	G	Q	L	P	A	F	E	E	L	E	K	I	S	E	Y	C	H
Template Known Secondary structure								T	T						S	S	T	T														S	.		T	T	S									T		S	S			S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure																																	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	.	.	.	.	.	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																.																									.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	I	S	L	H	L	D	G	A	R	L	W	E	I	T	P	F	Y	Q	K	S	A	E	E	I	C	A	L	F	D	S	V	Y	V	S	F	Y	G	I	G	G	I	A	G	.	A	I	L	A	G	N	D	D	F	V	Q	E	A	K	I	W	K	R	R	Y	G	G	D	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T								T	T		G	G	G					T								T	T		S												S	S		.																				T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	.	.	.	K	D	L	A	V	S
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		I	S	L	Y	P	Y	I	L	S	A	D	Y	Y	F	E	K	R	I	G	K	X	A	E	Y	F	E	A	A	K	G	L	A	E	R	F	N	S	C	S	G	V	K	T	V	P	E	V	P	V	S	N	X	F	H	V	Y	F	E	N	S	A	D	E	I	G	A	I	L	T	K	I	Q	D	E	T	G	V	G	I	S
Template Known Secondary structure		S																	G	G	G																	T	S	T	T					S	S	S		S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	.	.	.	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I
Query Conservation																																					.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	L	Q	E	K	S	A	D	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	E	V	S	V	G	D	A	F	A	E	I	P	A	K	N	L	E	L	V	F	R	C	L	E	K	E	L
Template Known Secondary structure		S							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						B		G	G	G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.																		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions