Job Description P0A6B7 Confidence 99.92% Date Wed Jan 25 15:20:14 GMT 2012 Rank 165 Aligned Residues 332 % Identity 19% Template c3nx3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (argd) from2 campylobacter jejuni Resolution 1.80 Å

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		6	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		Y	L	D	Y	S	A	.	.	.	.	.	.	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		Y	L	D	F	S	S	G	I	G	V	C	A	L	G	Y	N	H	A	K	F	N	A	K	I	K	A	Q	V	D	K	L	L	H	T	S	N	L	Y	Y	.	.	.	.	.	.	.	.	.	N	E	N	I	A	A	A	A	K	N	L	A	K	A	S	A	L	.	.	E	R	V	F	F	T	N	S	G	T	E	S	I
Template Known Secondary structure					S	S					T		T	T		B	S													T	T		S				T	T	S		.	.	.	.	.	.	.	.	.																T		.	.	S						S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.										.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure														.	.	.	.																																										.	.	.	.
Query SS confidence														.	.	.	.																																										.	.	.	.
Query Sequence		N	L	A	I	K	G	A	A	N	F	Y	Q	.	.	.	.	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	.	.	.	.	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M
Query Conservation														.	.	.	.																																										.	.	.	.
Alig confidence														.	.	.	.																																										.	.	.	.
Template Conservation
Template Sequence		E	G	A	X	K	T	A	R	K	Y	A	F	N	K	G	V	K	G	G	Q	F	I	A	F	K	H	S	F	H	G	R	T	L	G	A	L	S	L	T	A	N	E	K	Y	Q	K	P	F	K	P	L	I	S	G	V	K	F	A	K	Y	N	D	I	S	S	V	E	K	L	V	N	E	K	T	C	A	I	I	L	E
Template Known Secondary structure															T	T		T	T							T	T					S	S					T	T								G	G	G		S			S							T	T							T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		152	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure									.	.	.	.																										.	.	.																														.
Query SS confidence									.	.	.	.																										.	.	.																														.
Query Sequence		H	V	N	N	E	I	G	.	.	.	.	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	.	.	.	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	.	I	G	A	L	Y	V	R	R	K	P	R
Query Conservation									.	.	.	.																										.	.	.																														.
Alig confidence									.	.	.	.																										.	.	.																														.
Template Conservation
Template Sequence		S	V	Q	G	E	G	G	I	N	P	A	N	K	D	F	Y	K	A	L	R	K	L	C	D	E	K	D	I	L	L	I	A	D	E	I	Q	C	G	X	G	R	S	G	K	F	F	A	Y	E	H	A	Q	I	L	P	D	I	X	T	S	A	K	A	L	G	C	G	L	S	V	G	A	F	V	I	N	Q	K	V	A
Template Known Secondary structure		S				T	T	S																				T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V
Query Conservation
Alig confidence						.	.	.	.																																																										.	.	.	.
Template Conservation						.	.	.	.																																																										.	.	.	.
Template Sequence		S	N	S	L	.	.	.	.	E	A	G	D	H	G	S	T	Y	G	G	N	P	L	V	C	A	G	V	N	A	V	F	E	I	F	K	E	E	K	I	L	E	N	V	N	K	L	T	P	Y	L	E	Q	S	L	D	E	L	I	N	E	F	D	F	C	K	.	.	.	.	K	R	K	G	L	G	F	X	Q	G	L
Template Known Secondary structure					S	.	.	.	.		T	T			S	S		B	S																			T	T																								T	T			.	.	.	.						T	T
Template Predicted Secondary structure						.	.	.	.																																																										.	.	.	.
Template SS confidence
		267	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.
		304	.		.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.													.	.
Query SS confidence				.													.	.
Query Sequence		S	F	.	N	Y	V	E	G	E	S	L	I	M	A	L	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R
Query Conservation				.													.	.
Alig confidence				.													.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	D	K	S	V	K	V	A	K	V	I	Q	K	C	Q	E	N	A	L	L	L	I	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	N	D	L	R	F	L	P	P	L	I	L	Q	K	E	H	I	D	E	X	S	E	K	L	R	K	A	L	K	S
Template Known Secondary structure					T	T	S												T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								T	T																			T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.																								.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions