Job Description P0A6B7 Confidence 99.92% Date Wed Jan 25 15:20:14 GMT 2012 Rank 172 Aligned Residues 341 % Identity 16% Template c3mebB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.			70
Predicted Secondary structure																																	.	.																																.	.	.	.	.	.								.	.
Query SS confidence																																	.	.																																.	.	.	.	.	.								.	.
Query Sequence		M	K	L	P	I	Y	L	D	Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	.	.	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	.	.	.	.	.	.	G	A	D	P	R	E	I	.	.	V
Query Conservation																																	.	.																																.	.	.	.	.	.								.	.
Alig confidence																																	.	.												.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.								.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	V	G	A	Y	R	D	E	S	G	K	P	W	I	L	P	A	V	K	E	A	E	A	I	I	S	S	D	L	S	K	Y	N	K	E	Y	P	P	V	A	G	F	P	.	.	.	.	.	.	.	.	.	.	L	F	L	E	A	A	Q	F	L	M	F	G	K	D	S	K	A	A	Q	E	G	R	I	A	S	C
Template Known Secondary structure			S	S						T	T	S																	S		T	T	T	S			S				T	T				.	.	.	.	.	.	.	.	.	.													T	T						T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	.	.	.	.	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I
Query Conservation																																																							.	.	.	.
Alig confidence																			.	.																																			.	.	.	.
Template Conservation																			.	.
Template Sequence		Q	S	L	S	G	T	G	S	L	H	I	G	F	E	F	L	H	.	.	L	W	M	P	K	A	E	F	Y	M	P	S	T	T	W	P	N	H	Y	G	I	Y	D	K	V	F	N	K	L	K	V	P	Y	K	E	Y	T	Y	L	R	K	D	G	E	L	E	I	D	F	S	N	T	K	K	D	I	Q	S	A	P	E
Template Known Secondary structure				S															.	.				T	T							S	S			T												T	T	T	S								B		T	T	S		S	S	B												S		T
Template Predicted Secondary structure																			.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.											.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	.	.	.	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	.	.	.	.	.	.	.	.	.	.	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P
Query Conservation		.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	I	F	L	F	H	A	C	A	H	N	P	S	G	I	D	F	T	E	A	Q	W	K	E	L	L	P	I	M	K	E	K	K	H	I	A	F	F	D	S	A	Y	Q	G	F	A	T	G	S	F	E	A	D	A	F	A	V	R	M	F	V	D	A	G	V	E	V	L	V	A	Q	S	F	S	K	N	F	G	L
Template Known Secondary structure		T							S	S	S		T	T	T																				T								S		T	T	T	S	S	S						T										T										T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		211	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.										.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure				.	.																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence				.	.																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		K	G	.	.	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	.	.	.	.	.	.	.	.	.	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	.	.	.	.	.	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R
Query Conservation				.	.																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence				.	.																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		Y	G	E	R	I	G	C	L	H	V	V	H	A	G	V	E	G	S	V	E	K	N	K	A	L	S	A	A	M	V	S	G	M	T	L	Q	I	R	K	T	W	S	M	S	A	I	H	G	A	Y	I	V	Q	V	I	V	H	D	K	R	L	L	Q	M	F	Y	D	N	V	K	E	M	S	A	R	I	H	R	M	R
Template Known Secondary structure		G	G	G											S		S	S	S																					T	T	T	S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	.	.	.	.	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	L	H	A	S	L	A	K	R	K	T	P	G	P	G	S	K	G	T	W	D	H	I	L	T	A	I	G	M	F	T	F	T	G	L	T	P	E	H	V	D	Y	L	K	E	K	W	S	I	Y	L	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T				S	T	T	T	T			T							S	S																							B	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L
Query Conservation
Alig confidence		.								.
Template Conservation		.								.
Template Sequence		.	G	G	R	M	S	M	C	.	G	L	T	E	S	N	C	D	Y	V	A	E	A	I	H	D	A	V	T	K	L
Template Known Secondary structure		.	G	G				G	G	.	G			T	T	T															S
Template Predicted Secondary structure		.								.
Template SS confidence
			396	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions