Job Description P0A6B7 Confidence 99.95% Date Wed Jan 25 15:20:14 GMT 2012 Rank 113 Aligned Residues 329 % Identity 12% Template c3ke3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative serine-pyruvate aminotransferase; PDBTitle: crystal structure of putative serine-pyruvate aminotransferase2 (yp_263484.1) from psychrobacter arcticum 273-4 at 2.20 a resolution Resolution 2.20 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q
Query Conservation
Alig confidence																																		.																					.	.	.	.
Template Conservation																																		.																					.	.	.	.
Template Sequence		V	Y	T	D	R	A	L	N	H	X	S	K	A	F	Q	E	V	X	N	D	L	L	S	N	L	K	T	V	Y	N	A	E	.	A	A	V	I	I	P	G	S	G	T	Y	G	X	E	A	V	A	R	Q	L	.	.	.	.	T	I	D	E	D	C	L	I	I	R	N	G	W	F	S	Y	R	W	T	Q	I	L	E
Template Known Secondary structure		S			T	T	S			T	T	S																			T		S	.							S														.	.	.	.		T	T									S
Template Predicted Secondary structure																																		.																					.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	.	.	.	.	.	.	.	.	.	.	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	V	V	.	.	.	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		K	G	K	F	A	K	S	S	T	V	L	T	A	E	R	T	E	D	T	E	A	P	K	P	F	A	P	V	D	I	E	T	A	V	A	K	I	K	E	D	K	S	A	I	V	Y	A	P	H	V	E	T	S	S	G	I	I	L	S	E	E	Y	I	K	A	L	S	E	A	V	H	S	V	G	G	L	L	V	I	D
Template Known Secondary structure						S	S										S	S			S	S																				T		S						S			T	T	T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	R	G	M	R	S	G	T	L
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		C	I	A	S	.	G	C	V	W	L	D	X	K	E	L	G	I	D	V	L	I	S	A	P	Q	G	W	S	S	T	P	C	A	G	L	V	X	L	S	A	A	A	I	K	K	V	E	S	T	E	S	N	C	F	S	L	D	L	K	Q	W	L	T	I	X	R	A	Y	E	N	G	G	H	A	Y	H	A	T	X	P
Template Known Secondary structure			T	T		.	T	T									T		S											S																			T				S		S	T	T														T	T	S				S	S
Template Predicted Secondary structure						.
Template SS confidence
		174	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	S	L	R	Q	F	R	D	A	I	L	E	A	K	E	I	G	F	D	I	L	R	D	A	Q	W	E	L	G	N	R	V	R	K	V	L	T	D	K	G	I	E	S	V	A	A	E	G	F	E	A	P	G	V	V	V	S	Y	T	E	R	D	D	X	H	K	G	S	A	F	A	E	A	G	L	Q	I	A	A
Template Known Secondary structure																																									T	T			B	S	B		T	T		B		S	S							S						S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	P	L	K	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	D	N	F	K	T	F	R	L	G	L	F	G	L	D	K	L	T	D	I	D	G	T	V	E	R	F	E	K	A	L	D	E	V	L	A
Template Known Secondary structure						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										S					T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340															.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions