Job Description P0A6B7 Confidence 99.96% Date Wed Jan 25 15:20:14 GMT 2012 Rank 76 Aligned Residues 322 % Identity 13% Template c3jtxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (np_283882.1) from neisseria2 meningitidis z2491 at 1.91 a resolution Resolution 1.91 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.
Query Sequence		P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	.	.	.	.	.	.	.	.	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G
Query Conservation																																																					.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	P	K	V	I	T	D	A	L	T	A	S	L	H	E	L	E	K	Y	P	L	T	A	G	L	.	.	.	.	.	.	.	.	.	.	.	.	P	E	L	R	Q	A	C	A	N	W	L	K	R	R	Y	D	G	L	T	V	D	A	D	N	E	I	L	P	V	L	G	S	R	E	A	L	F	S	F	V	Q	T
Template Known Secondary structure														T	G	G	G	G	G	S				T	T			.	.	.	.	.	.	.	.	.	.	.	.															T	T	T					T	T	T	S					S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.													.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.
Predicted Secondary structure																																															.																													.	.	.
Query SS confidence																																															.																													.	.	.
Query Sequence		A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	.	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	.	.	.	V	V	Q
Query Conservation																																															.																													.	.	.
Alig confidence					.																												.	.	.												.																													.	.	.
Template Conservation					.																												.	.	.
Template Sequence		V	L	N	.	P	V	G	I	K	P	A	I	V	S	P	N	P	F	Y	Q	I	Y	E	G	A	T	L	L	G	G	G	.	.	.	E	I	H	F	A	N	C	P	A	P	S	F	N	P	D	W	R	S	I	S	E	E	V	W	K	R	T	K	L	V	F	V	C	S	P	N	N	P	S	G	S	V	L	D	L	D
Template Known Secondary structure					.													S												T	T		.	.	.									T	T	T					G	G	G	S						T	T								S	S		T	T	T
Template Predicted Secondary structure					.																												.	.	.
Template SS confidence
		110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.													.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	.	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		G	W	K	E	V	F	D	L	Q	D	K	Y	G	F	I	I	A	S	D	E	C	Y	S	E	I	Y	F	D	G	N	K	P	L	G	C	L	Q	A	A	A	Q	L	G	R	S	R	Q	K	L	L	X	F	T	S	L	S	R	S	N	V	P	G	L	R	S	G	F	V	A	G	D	A	E	L	L	K	N	F	L	L
Template Known Secondary structure																						T	T	T	T			S	T	T													T	T				T	T											S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Sequence		Y	R	T	Y	H	G	S	A	X	S	.	.	.	.	.	.	.	.	I	P	V	Q	R	A	S	I	A	A	W	D	D	E	Q	H	V	I	D	N	R	R	L	Y	Q	E	K	F	E	R	V	I	P	I	L	Q	Q	V	F	D	.	.	.	.	.	V	K	L	P	D	A	S	F	Y	I	W	L	K	V	P	D	G
Template Known Secondary structure							T					.	.	.	.	.	.	.	.																																				T	T	T	S		.	.	.	.	.					S	S	S	S							T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.									.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		309	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		E	G	E	S	L	I	M	A	L	.	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I
Query Conservation											.	.	.
Alig confidence											.	.	.																		.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		D	D	L	A	F	A	R	N	L	W	Q	K	A	A	I	Q	V	L	P	G	R	F	L	A	R	D	T	E	Q	.	.	.	.	.	.	.	.	.	.	.	G	N	P	G	E	G	Y	V	R	I	A	L	V	.	.	A	D	V	A	T	C	V	K	A	A	E	D	I	V	S	L	Y
Template Known Secondary structure																					G	G	G	G	S			B	T	T	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T	T								.	.	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.												.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions