Phyre 2 alignment of P0A6B7 with c3gwpA

Job Description P0A6B7
Confidence 99.81% Date Wed Jan 25 15:20:14 GMT 2012

Rank 229 Aligned Residues 284

% Identity 15% Template c3gwpA_

PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	.	.	.	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K
Query Conservation																																																								.	.	.
Alig confidence																															.	.	.	.	.																	.	.			.	.	.																.	.	.	.
Template Conservation																															.	.	.	.	.																	.	.																					.	.	.	.
Template Sequence	L	K	V	L	N	A	F	Q	E	E	R	I	S	E	A	H	F	T	N	S	S	G	Y	G	Y	G	D	I	G	R	.	.	.	.	.	D	S	L	D	A	V	Y	A	R	V	F	N	T	E	S	A	.	.	L	V	R	P	H	F	V	N	G	T	H	A	L	G	A	A	L	F	G	N	.	.	.	.	L	R	P
Template Known Secondary structure										T	T			G	G	G	S					T	T		T	T					.	.	.	.	.											T	T		S			.	.			B	T	T			S													.	.	.	.			T
Template Predicted Secondary structure																															.	.	.	.	.																	.	.																					.	.	.	.
Template SS confidence
	45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.

	94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query Sequence	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	.	.	.	.	.	.	.	.	.	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	.	.	.	.	.	.	V	N	N	E	I	G
Query Conservation																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Conservation
Template Sequence	G	N	T	X	L	S	V	C	G	E	P	Y	D	T	L	H	D	V	I	G	I	T	E	N	S	N	X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	D	G	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	L	V	H	I	Q	R	S	T	G	Y	G	W	R	R	A	L
Template Known Secondary structure	T						S	S	S	S			T	T						T	S	S				T	T			T	G	G	G	T								B		T	T	S	S	B													T	T									S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
	114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																	.	.																																					.	.
Query SS confidence																	.	.																																					.	.
Query Sequence	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	.	.	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	.	.	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G
Query Conservation																	.	.																																					.	.
Alig confidence																	.	.																																					.	.
Template Conservation
Template Sequence	L	I	E	D	I	K	S	I	V	D	C	V	K	N	I	R	K	D	I	I	C	F	V	D	N	C	Y	G	E	F	X	D	T	K	E	P	T	D	V	G	A	D	L	I	A	G	S	L	I	N	I	G	G	G	I	A	P	T	G	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L	T	V	P	G
Template Known Secondary structure																	T	T	S							T	T		T	T	S	S	S	S		G	G	G	G	T		S									T	T	T	T	T			S																			S		T	T
Template Predicted Secondary structure
Template SS confidence
	194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

	235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.																																										.	.
Template Conservation																									.	.	.	.	.	.	.																																										.	.
Template Sequence	I	G	G	E	C	G	S	T	F	G	V	V	R	S	X	Y	Q	G	L	F	L	A	P	H	.	.	.	.	.	.	.	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	F	E	V	X	P	K	Y	D	E	K	R	S	D	I	I	Q	S	I	K	F	N	.	.	D	K	D	K	L	I
Template Known Secondary structure	T	G	G	G	S				T	T															.	.	.	.	.	.	.																			T	T					S		T	T	S			S	S	S							S	.	.	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.																																										.	.
Template SS confidence
	275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.								.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.

	315	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence	M	A	L	K	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	F	C	K	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	346	.	.	.	350	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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