Job Description P0A6B7 Confidence 99.95% Date Wed Jan 25 15:20:14 GMT 2012 Rank 119 Aligned Residues 332 % Identity 17% Template c3eleB_ PDB info PDB header:transferase Chain: B: PDB Molecule:amino transferase; PDBTitle: crystal structure of amino transferase (rer070207001803) from2 eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure											.																						.	.	.																														.	.	.	.	.	.
Query SS confidence											.																						.	.	.																														.	.	.	.	.	.
Query Sequence		I	Y	L	D	Y	S	A	T	T	.	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	.	.	.	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	.	.	.	.	.	.	A	D	P	R	E	I	V	F	T	S	G
Query Conservation											.																						.	.	.																														.	.	.	.	.	.
Alig confidence											.																						.	.	.									.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	F	S	I	G	N	P	S	I	P	A	P	Q	I	V	N	D	T	I	K	E	L	V	T	D	Y	D	S	V	A	L	H	G	Y	T	S	A	Q	G	D	V	.	.	.	.	.	.	.	.	.	.	E	T	R	A	A	I	A	E	F	L	N	N	T	H	G	T	H	F	N	A	D	N	L	Y	X	T	X	G
Template Known Secondary structure											S																	S							S				T	T				.	.	.	.	.	.	.	.	.	.																				G	G	G					S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.											.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	.	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V
Query Conservation																																																										.
Alig confidence														.	.	.																		.	.	.																						.
Template Conservation														.	.	.																		.	.	.
Template Sequence		A	A	A	S	L	S	I	C	F	R	A	L	.	.	.	T	S	D	A	Y	D	E	F	I	T	I	A	P	Y	F	P	E	.	.	.	Y	K	V	F	V	N	A	A	G	A	R	L	V	E	V	P	A	D	T	E	H	F	Q	I	D	F	D	A	L	E	E	R	I	N	A	H	T	R	G	V	I	I	N	S	P
Template Known Secondary structure														.	.	.			S	T	T							S	S			T	T	.	.	.								T	T										T	T	T	S	S									T			T	T								S	S
Template Predicted Secondary structure														.	.	.																		.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		154	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.
Predicted Secondary structure											.	.	.													.	.	.	.	.	.											.	.	.	.	.																													.	.
Query SS confidence											.	.	.													.	.	.	.	.	.											.	.	.	.	.																													.	.
Query Sequence		N	N	E	I	G	V	V	Q	D	.	.	.	I	A	A	I	G	E	M	C	R	A	R	G	.	.	.	.	.	.	I	I	Y	H	V	D	A	T	Q	S	.	.	.	.	.	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	.	.	I	G	A	L	Y
Query Conservation											.	.	.													.	.	.	.	.	.											.	.	.	.	.																													.	.
Alig confidence											.	.	.													.	.	.	.	.	.											.	.	.	.	.																													.	.
Template Conservation
Template Sequence		N	N	P	S	G	T	V	Y	S	E	E	T	I	K	K	L	S	D	L	L	E	K	K	S	K	E	I	G	R	P	I	F	I	I	A	D	E	P	Y	R	E	I	V	Y	D	G	I	K	V	P	F	V	T	K	Y	Y	D	N	T	L	V	C	Y	S	Y	S	K	S	L	S	L	P	G	E	R	I	G	Y	V	L
Template Known Secondary structure			T	T	T																								T	S									T	T	T	T		B		T	T						G	G	G	T		S	S							S	T	T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A
Query Conservation
Alig confidence																							.	.	.	.	.																																														.	.	.	.
Template Conservation																							.	.	.	.	.																																														.	.	.	.
Template Sequence		V	P	D	E	V	Y	D	K	A	E	L	Y	A	A	V	C	G	A	G	R	A	.	.	.	.	.	L	G	Y	V	C	A	P	S	L	F	Q	K	X	I	V	K	C	Q	G	A	T	G	D	I	N	A	Y	K	E	N	R	D	L	L	Y	E	G	L	T	R	I	G	Y	H	C	.	.	.	.	F	K	P	D	G
Template Known Secondary structure				T	T	S	T	T															.	.	.	.	.	T	T				S									T	T		T	T																							T				.	.	.	.				S	B
Template Predicted Secondary structure																							.	.	.	.	.																																														.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K
Query Conservation																						.	.
Alig confidence																						.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		A	F	Y	X	F	V	K	A	L	E	D	D	S	N	A	F	C	E	K	A	K	E	E	D	V	L	I	V	A	A	D	G	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	P	G	W	V	R	I	S	Y	C	.	.	V	D	R	E	X	I	K	H	S	X	P	A	F	E	K
Template Known Secondary structure		S	S							S	S	S												T	T						G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								.	.	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.																				.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		376	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	G	R	L	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	K	K	Y	N	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions