Job Description P0A6B7 Confidence 99.92% Date Wed Jan 25 15:20:14 GMT 2012 Rank 168 Aligned Residues 329 % Identity 15% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.
Template Sequence		I	A	S	E	N	I	V	S	R	A	V	L	D	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	H	A	.	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	.	.
Template Known Secondary structure			T	T													T	S	G	G	G	S	S		T	T			.	.	.	.	.	.	.	.	.	.	.	.															T	T		S			.					S	S													.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A	I	G	E
Query Conservation
Alig confidence		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		.	.	A	K	P	G	D	T	V	L	G	M	S	L	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	I	I	A	G	F	S	A	.	Y	P	R	K	L	D	F	A	R	F	R	A
Template Known Secondary structure		.	.			T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B		T	T	T		S	B															S							S		.		S	S
Template Predicted Secondary structure		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
				114	.	.	.	.	.	120	.	.	.	.	.	.	.	.																.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	.	.	.	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P
Query Conservation																													.	.	.
Alig confidence																													.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	H	A	H	V	V	T	S	T	T	H	K	T	L	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	A	V	G	P	.	.	.	.	.	.	.	.	.	.	L	M
Template Known Secondary structure						T	T								T	T	T						T	T	S	S			G	G	G	T		S						S	S	G	G	G		S		S							S															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.											.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	.	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N
Template Known Secondary structure															T	S																								T	T	.				G	G	G	S		S	S	S							G	G	G	T													T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	.	.	.	.	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D	L	S	P	L	W	E	M	Y	K	Q
Query Conservation																																			.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	G	I	P	F	D	P	E	K	P	.	.	.	.	.	.	.	.	.	.	.	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L	R	T	N	P	E	G	D	H	A	T	E	Q
Template Known Secondary structure						T	T		S	S		T	.	.	.	.	.	.	.	.	.	.	.	T	T		S												T	T																					T	T		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.												360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions