Phyre 2 alignment of P0A6B7 with c3e6gA

Job Description P0A6B7
Confidence 99.90% Date Wed Jan 25 15:20:14 GMT 2012

Rank 201 Aligned Residues 302

% Identity 16% Template c3e6gA_

PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae

Resolution 2.80 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R
Query Conservation
Alig confidence																				.	.																		.	.	.	.	.
Template Conservation																				.	.																		.	.	.	.	.
Template Sequence	P	T	R	F	A	Y	E	R	C	V	A	A	L	E	G	G	T	R	A	.	.	F	A	F	A	S	G	M	A	A	T	S	T	V	M	E	L	L	.	.	.	.	.	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	L	F	E	R	V	R	R	R	T	A	G	L	D	F	S	F	V	D	L
Template Known Secondary structure															T		S			.	.				S	S										T	T	S	.	.	.	.	.		T	T							S	S																										T
Template Predicted Secondary structure																				.	.																		.	.	.	.	.
Template SS confidence
	64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

	129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y
Query Conservation
Alig confidence		.	.	.																																																					.
Template Conservation		.	.	.																																																					.
Template Sequence	T	.	.	.	D	P	A	A	F	K	A	A	I	R	A	D	T	K	M	V	W	I	E	T	P	T	N	P	M	L	K	L	V	D	I	A	A	I	A	V	I	A	R	K	H	G	L	L	T	V	V	D	N	T	F	A	.	S	P	M	L	Q	R	P	L	S	L	G	A	D	L	V	V	H	S	A	T	K	Y	L
Template Known Secondary structure	T	.	.	.											T	T								S	S		T	T	T																T	T								S	S	S	.		T	T	T			G	G	G	G	T		S						T	T	T	T	T
Template Predicted Secondary structure		.	.	.																																																					.
Template SS confidence
	137				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

	209	210	.	.				.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure					.	.	.						.	.
Query SS confidence					.	.	.						.	.
Query Sequence	G	P	K	G	.	.	.	I	G	A	L	Y	.	.	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D
Query Conservation					.	.	.						.	.
Alig confidence					.	.	.						.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	F	L	Q	N	S	I	G	G	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	P	F	D	S	F	L	A	L	R	G	L	K	T	L	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T
Template Known Secondary structure	T		S	S	S										S																		B			.	.	.	.	.	.	.	.	.	.	.												T	T																					T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

	284	.	.	.	.	.	290	.	.	.															.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.												.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.												.	.
Query Sequence	I	E	E	V	Y	L	N	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	.	.	V	E	G	E	S	L	I	M	A	L	K	.	.	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.												.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.												.	.
Template Conservation
Template Sequence	H	P	A	I	E	K	V	I	Y	P	G	L	A	S	H	P	Q	H	V	L	A	K	R	Q	M	S	G	F	G	G	I	V	S	I	V	L	K	G	G	F	D	A	A	K	R	F	C	E	K	T	E	L	F	T	L	A	E	S	L	G	G	V	E	S	L	V	N	H	P	A	V	M	T	H	A	S	I	P	V	A
Template Known Secondary structure		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T													S	S	S				S					S	S						T	T	T	T	T	T		S	S			T
Template Predicted Secondary structure
Template SS confidence
	282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

	346	.	.	.					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence	D	E	L	A	.	.	.	.	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.											.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence	R	R	E	Q	L	G	I	S	D	A	L	V	R	L	S	V	G	I	.	.	.	.	E	D	L	G	D	L	R	G	D	L	E	R	A
Template Known Secondary structure	T	T	T	T	S	S			S	S								S	.	.	.	.	S										T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
	362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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