Job Description P0A6B7 Confidence 99.95% Date Wed Jan 25 15:20:14 GMT 2012 Rank 115 Aligned Residues 332 % Identity 14% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	.	.	.	.	.	.	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																								.
Template Conservation																															.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		S	P	P	Q	F	A	I	K	E	A	Q	K	A	L	D	I	P	M	V	N	Q	Y	S	P	T	R	G	R	P	.	.	.	.	.	.	.	.	.	.	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	V	T	V	T	T	G	A	N	E	G	I	L	S	C	L	M	G	L	.
Template Known Secondary structure															T	T	S	G	G	G	G	S				T	T				.	.	.	.	.	.	.	.	.	.														T	T	S				G	G	G					S														.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	.	.	.	.	.	.	.	.	.	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	N	A	G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	N	I	E	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K	E	L	D	Q	R	N	T	R	G	E	E	W	T	I	D	F	E	Q	F	E	K	A	I	T	S	K	T	K	A	V	I	I	N	T	P	H	N	P	I	G
Template Known Secondary structure		.	.	.			T	T								S			T	T								T	T												T	T	T	T	T	S		B		G	G	G	S										T			T	T								S	S		T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		159	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.		.	220	.	.	.	.	.
Predicted Secondary structure				.	.	.																									.	.	.	.	.	.	.	.																													.							.
Query SS confidence				.	.	.																									.	.	.	.	.	.	.	.																													.							.
Query Sequence		V	V	.	.	.	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	.	.	.	.	.	.	.	.	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	.	I	G	A	L	Y	V	.	R	R	K	P	R	V	R
Query Conservation				.	.	.																									.	.	.	.	.	.	.	.																													.							.
Alig confidence				.	.	.																									.	.	.	.	.	.	.	.																													.							.
Template Conservation
Template Sequence		K	V	F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	V	V	I	I	S	D	E	V	Y	E	H	L	Y	F	T	D	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A	G	S	F	A	A	T	G	W	R	I	G	W	V	L	S	L	N	A	E	L	L	S	Y
Template Known Secondary structure																				T								T	T	T	T		B		S	S					G	G	G	S						T	T											S		T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	.
Query Conservation																																																																																	.
Alig confidence															.	.	.	.	.																																																.	.													.
Template Conservation															.	.	.	.	.																																																.	.
Template Sequence		A	A	K	A	H	T	R	I	C	F	A	S	P	.	.	.	.	.	S	P	L	Q	E	A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	G	L	P	Y	T	A	.	.	P	E	G	T	Y	F	V	L	V	D	F	S	K
Template Known Secondary structure										T	S	S			.	.	.	.	.																		T																								T						.	.		S	B	S	S							T	T
Template Predicted Secondary structure															.	.	.	.	.																																																.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.
															305	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	Y	V	E	G	E	S	L	I	M	A	L	.	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	.	.	.	.	.	.	.	.	.	.	.	.	A	E	N	L	L	R	F	A	V	C	.	.	K	D	D	A	Y	L	E	N
Template Known Secondary structure		S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T								.	.	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.													.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.
		369	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	E	L	V	R	K	S	I	G	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	E	R	L	K	L	L	K	D	Y	L
Template Known Secondary structure							G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions