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Job DescriptionP0A6B7
Confidence99.93%DateWed Jan 25 15:20:14 GMT 2012
Rank143Aligned Residues337
% Identity14%Templatec2zc0C_
PDB info PDB header:transferaseChain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30. ........40.........50.........60... ......70.........80
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Query Sequence  DYSATTPVDPRVAEKMMQFMTMDG. TFGNPASRSHRFGWQAEEAVDIARNQIADLVG. . . . . . ADPREIVFTSGATESDN
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Template Sequence  DPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIP. . . . . . . . . . ELREELAAFLKKYDHLEVSPENIVITIGGTGALD
Template Known Secondary structure 


TTTS

GGGGS


TT

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GGG
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   43......50.........60.........70........ .80.........90.........100.........110..
 
   81........90.........100.........110.........120.........130.........140... ......150....
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Query Sequence  LAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD. . . . . . DTILVSIMHVN
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Template Sequence  LLGRVL. . . . IDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPM
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TT
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   113..... .120.........130.........140.........150.........160.........170.........180........
 
   155....160.........170.........180...... ...190.........200.........210.. .......220......
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Query Sequence  NEIGVVQDIAAIGEMCRARGIIYHVDATQSVG. . . . . . . KLPIDLSQLKVDLMSFSGHKIYGPKG. IGALYVRRKPRVRI
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Template Sequence  GVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKV
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T

TTTT
BSS
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GGGG
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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  EAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN
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Template Sequence  LMQKQPIDFCAPA. . . . ISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFL. PE
Template Known Secondary structure  TTTTSSS
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SBSS
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   269270.........280. ........290.........300.........310.........320.........330.........340. ..
 
   307..310....... ..320.........330.........340.........350.........360.........370.........
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Query Sequence  YVEGESLIMAL. . . KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR
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Template Sequence  GADGISFANELMEREGVVVVPGKPFY. . . . . . . . . . . . . . . TDESGKNAIRLNFS. RPSKEEIPIGIKKLAKLYKE
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TT

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GGG
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   344.....350.........360......... 370.........380... ......390.........400...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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