Job Description P0A6B7 Confidence 99.97% Date Wed Jan 25 15:20:14 GMT 2012 Rank 51 Aligned Residues 331 % Identity 15% Template c2yrrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 Resolution 1.86 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	.	.	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A
Query Conservation																																																														.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	G	P	T	P	I	P	E	R	V	Q	K	A	L	L	R	P	.	.	.	.	.	.	.	.	.	.	.	.	M	R	G	H	L	D	P	E	V	L	R	V	N	R	A	I	Q	E	R	L	A	A	L	F	D	P	G	E	G	A	L	V	A	A	L	A	G	S	G	S	L	G	M	E	A	G	L	A	N	L
Template Known Secondary structure		S	S	S	S									G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.				T	T																							T	T							S	S												T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.													.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	.	I	L	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A
Query Conservation																																																													.
Alig confidence		.	.	.	.	.																	.	.																																					.
Template Conservation		.	.	.	.	.																	.	.
Template Sequence		.	.	.	.	.	D	R	G	P	V	L	V	L	V	N	G	A	F	S	Q	R	.	.	V	A	E	M	A	A	L	H	G	L	D	P	E	V	L	D	F	P	P	G	E	P	V	D	P	E	A	V	A	R	A	L	K	R	R	R	Y	R	M	V	A	L	V	H	G	E	T	S	T	G	V	L	N	P	A	E	A
Template Known Secondary structure		.	.	.	.	.	S										S						.	.								T	T										T	T	S														S			S						S			T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.																	.	.
Template SS confidence
							73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																												.																													.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																													.	.	.	.	.	.	.	.	.
Query Sequence		I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	.	Y	G	P	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	.	.	.	.	.	.	.	.	.
Query Conservation																																												.																													.	.	.	.	.	.	.	.	.
Alig confidence																																												.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	A	L	A	K	E	A	G	A	L	F	F	L	D	A	V	T	T	L	G	M	L	P	F	S	M	R	A	M	G	V	D	Y	A	F	T	G	S	Q	K	C	L	S	A	P	P	G	L	A	P	I	A	A	S	L	E	A	R	K	A	F	T	G	K	R	G	W	Y	L	D	L	A	R	V	A	E	H	W	E
Template Known Secondary structure										T								T	T	T	T	T	T	S								T		S						T	T	S	T	T				S	S																		S		S	T	T										T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		R	G	G	Y	H	H	T	T	P	V	L	L	H	Y	A	L	L	E	A	L	D	L	V	L	E	E	G	V	A	A	R	E	R	R	A	R	E	V	Y	A	W	V	L	E	E	L	K	A	R	G	F	.	R	P	Y	P	K	A	S	P	L	P	T	V	L	V	V	R	P	P	E	G	V	D	A	D	R	L	V	R
Template Known Secondary structure		T				S	S																																											T	T		.			S		S	S	S	B		T	T								T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		316	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																								.
Query SS confidence				.	.																																								.
Query Sequence		A	L	.	.	K	D	L	A	V	S	S	G	S	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	.	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G
Query Conservation				.	.																																								.
Alig confidence				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	Y	A	E	G	V	A	V	A	G	G	I	G	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	Q	V	L	R	L	G	L	M	G	E	G	A	R	R	E	A	Y	Q	A	F	L	K	A	L	D	R	A	L	A
Template Known Secondary structure						T	T								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T							S	G	G	G	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320																				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions