Job Description P0A6B7 Confidence 99.96% Date Wed Jan 25 15:20:14 GMT 2012 Rank 80 Aligned Residues 346 % Identity 18% Template c2cb1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2. Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	P	I	Y	L	D	Y	S	A	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N
Query Conservation
Alig confidence									.	.	.																									.	.	.	.	.	.	.	.	.																									.	.
Template Conservation									.	.	.																									.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		V	G	L	P	I	Y	A	.	.	.	V	A	A	Y	G	F	K	T	L	E	E	G	Q	E	R	F	A	T	G	E	G	Y	V	Y	.	.	.	.	.	.	.	.	.	A	R	Q	K	D	P	T	A	K	A	L	E	E	R	L	K	A	L	E	G	A	L	E	A	.	.	V	V	L	A	S	G	Q	A	A	T	F
Template Known Secondary structure		S	S						.	.	.		S	B				S	S													S		S	B	.	.	.	.	.	.	.	.	.	T	T	T																	T		S			.	.				S	S
Template Predicted Secondary structure									.	.	.																									.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	.	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S	I	M	H	V	N	N	E	I	G	V
Query Conservation																																			.
Alig confidence								.	.	.	.																								.														.	.	.	.	.	.
Template Conservation								.	.	.	.																																						.	.	.	.	.	.
Template Sequence		A	A	L	L	A	L	.	.	.	.	L	R	P	G	D	E	V	V	A	A	K	G	L	F	G	Q	T	I	G	L	F	G	Q	V	L	S	L	M	G	V	T	V	R	Y	V	D	P	.	.	.	.	.	.	E	P	E	A	V	R	E	A	L	S	A	K	T	R	A	V	F	V	E	T	V	A	N	P	A	L	L
Template Known Secondary structure						T	T	.	.	.	.			T	T							T	T												T	T	T	T	T	T								S	.	.	.	.	.	.	S										T	T								S	S		T	T	T
Template Predicted Secondary structure								.	.	.	.																																						.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	.	.	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		V	P	D	L	E	A	L	A	T	L	A	E	E	A	G	V	A	L	V	V	D	N	T	F	G	A	A	G	A	L	C	R	P	L	A	W	G	A	H	V	V	V	E	S	L	T	W	A	S	G	H	G	S	V	L	G	G	A	V	L	S	R	E	T	E	L	W	R	N	Y	P	Q	F	L	Q	P	W	E	A	L
Template Known Secondary structure																T								G	G	G	T	T	T	T	S			G	G	G	G	T		S										S		S	S													S	G	G	G	G	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250											.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	R	S	G	T	L	P	V	H	Q	I	V	.	.	.	.	.	.	.	.	.	.	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	R	C	F	P	E	R	V	R	T	L	G	L	S	L	C	G	M	A	L	S	P	F	N	A	Y	L	L	F	Q	G	L	E	T	V	A	L	R	V	A	R	M	S	E	T	A	R	F	L	A	E	R	L	Q	G	H	P	K	V	K	A	L	R	Y	P	G	L	P	E	D	P	A	H	R	N	A	R	K	Y
Template Known Secondary structure		G	G	G											T	T	T	T																G	G	G																					T		T	T		S					T	T	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
			295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.									.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure		.																											.	.							.	.	.	.	.	.	.	.
Query SS confidence		.																											.	.							.	.	.	.	.	.	.	.
Query Sequence		.	H	G	A	P	N	I	L	N	V	S	F	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	.	.	A	V	S	S	G	S	.	.	.	.	.	.	.	.	A	C	T	S	A	S	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E
Query Conservation		.																											.	.							.	.	.	.	.	.	.	.
Alig confidence		.																											.	.							.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		L	A	S	G	G	P	I	L	T	L	D	L	G	D	L	E	R	A	S	R	F	L	G	A	I	R	L	L	K	A	A	N	L	G	D	A	R	T	L	L	V	H	P	W	T	T	T	H	S	R	L	K	E	E	A	R	L	Q	A	G	V	T	P	.	.	.	.	G	L	V	R	V	S	V	G	L	E	D	P	L
Template Known Secondary structure			S	S	S		S							S	S												S	S				S			S		S	S						T	T	T	T	T	T	T	T	S								T	T			T	.	.	.	.	T								S	S
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.					.	.	.	390	.	.	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	I	D	Y	T	I	E	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	L	A	L	F	E	E	A	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions