Job Description P77562 Confidence 93.04% Date Thu Jan 5 12:30:35 GMT 2012 Rank 1 Aligned Residues 102 % Identity 25% Template d1qsaa2 SCOP info Lysozyme-like Lysozyme-like Bacterial muramidase, catalytic domain Resolution 1.65

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	K	D	L	A	T	T	F	E	S	Q	G	L	A	P	T	L	E	N	V	C	S	V	L	A	V	A	Q	Q	E	S	N	Y	Q	A	D	P	A	V	P	G	L	S	K	I	A	W	Q	E	I	D	R	R	A	E	R	M	H	I	P	A	F	L	V	H	T	A	L	K	I	K	S	P	N	G	K	S	Y	S
Query Conservation
Alig confidence																		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	D	L	F	K	R	Y	T	S	G	K	E	I	P	Q	.	.	.	.	.	S	Y	A	M	A	I	A	R	Q	E	S	A	W	N	P	K	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T									T	T	S	S	S			.	.	.	.	.												T	T		T	T		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.						.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	D	S	V	R	T	E	K	Q	L	S	A	I	F	D	D	L	I	N	M	V	P	M	G	Q	T	L	F	G	S	L	N	P	V	R	T	G	G	P	M	Q	V	S	I	A	F	A	E	Q	H	T	K	G	Y	P	W	K	M	D	G	T	V	R	Q	E	V	F	S	R	R	G	G	L	W	F	G	T	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	V	G	A	S	G	L	M	Q	I	M	P	G	T	A	T	H	T	V	K	M	F	S	I	P	G	Y	S	S	P	.	G	Q	L	L	D	P	E	T	N	I	N	I	G	T	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			B	T	T	T	T	B													T			S				G	.	G	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
																																			487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		216	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		H	L	L	N	Y	P	A	S	Y	.	S	A	P	I	Y	R	F	A	D	F	N	A	G
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		Y	L	Q	Y	V	Y	Q	Q	F	G	N	N	R	I	F	S	S	A	A	Y	N	A	G
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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